KEGG   Rosa chinensis (China rose): 112187486
Entry
112187486         CDS       T06020                                 
Name
(RefSeq) ABC transporter C family member 13 isoform X1
  KO
K05674  ATP-binding cassette, subfamily C (CFTR/MRP), member 10
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112187486
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rcn02000]
    112187486
Transporters [BR:rcn02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    112187486
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N Dynamin_N MMR_HSR1 RsgA_GTPase AAA_29 AAA_16 AAA_22 AAA_23 nSTAND1 AIG1
Other DBs
NCBI-GeneID: 112187486
NCBI-ProteinID: XP_024182068
LinkDB
Position
2:49491716..49514301
AA seq 1466 aa
MDDITNLICPNSPSVWDGNGLSKCYGNILLAFGPNIVTLAVIFVLGITPRTGRRTWRMNF
SERFFLHVLPAVGACSAFFDIALLLKKGRGGVLVAKHEWLFRCSQFAVWTVVILFSRCFN
ACHIFGNRILCFWWLVKILLATLHLFTTYPSFKVLLSLKEIGTVSLDVVFGISINIIRMK
RASSNRSSMEDSLLSADMDLEEGSLKDSGDNQSYFNLMTFRSITSVMSHGVTKQLEFEDL
LQLPTDMDPCSCHDALFSCWKSQQSSCPDPSLFRAICSAYGWPYVRLGLLKVLNDSVGFA
GPLLLNKLIRFLQQGSQNLDGYVLAVSLGLISIFKSFLDTQYTFHLSKLKLKLRSSIMTV
IYQKCLCVNLAERSKFTEGEIQTFMAIDSDRIVNLSNTLHDMWSLPLQIGVALFLLYTQV
KFAFVSGLAITIALIPVNKWISTLIARATVKMMKQKDERIRRTGELLTYIRTLKMYGWEL
LFSSWLMETRLSEVMHLTTRKYLDAWCVFFWATTPTLFSLCTFGLFTLMGHQLDAATVFT
CVALFNTLISPLNSFPWVINGLIDAVISVRRLSRFLSCSERKSKLEKTADASSPYFSNDQ
CEFTFEDMAVVFDDSSCSWSSSDEKELNLVLNHVTLGIPKGSFIAVIGEVGSGKSSLLNS
ILGEMQLVHGSVYSCGSIAYVPQVPWILSGTIRDNILFGKQYDPKRYTDTLEASALDVDI
SIMVGGDMAYIGEKGVNLSGGQRARIALARAIYNGSDMFILDDVLSAVDARVARCILYNA
ILGPLMKKQTRVLCTHNVQAISSADTIVVMEKGHVKWVGPSACLPASSYSAFSPLNEFDK
FLLNEGKECNVPADSLTKDQQNLPLEKDIVPASEGRQDIIEVEARKEGKVELSVYKNYAT
FTGWFISVVIFLSAILMQASRNGNDLWLSYWVDTTGKSQKGYSTSFYLVILCIFCTANSV
LTLVRAFSFAYGGVRAAVKVHDTLLKRLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLP
FILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYTKLQFFYRSTSRELRRLDSVSR
SPIYTSFTETLDGSSTIRAFKSEDFFLARFTDQVKLYQQTSYTELNASLWLSLRLQLSAA
FIISFVAIMAVLGSHGGLPIGFSTPGLVGLALSYAAPVVNLLGSFLTSFTETEKEMVSIE
RALEYMEVPQEEVDGLQSLNCNWPFQGRIEFQNVTLRYKPSFPAALCDISFTIDGGMQVG
IVGRTGAGKSSVLNALFRLTPICTGCILVDDINIANAPIRDLRGHFSVVPQTPFLFEGSL
RDNLDPFRLSDDYKIWKALERCHVKEEVEAAGGLDIHLSESRMSFSVGQRQLLCLVRALL
KSSKVLCLDECTANVDTQTASTLQKTISSECSGMTVITIAHRISTILNMDNVLILDHGIL
VEQGNPQALLQNEFSRFSSFAKASTM
NT seq 4401 nt   +upstreamnt  +downstreamnt
atggacgatatcacgaacctgatctgccctaattctccctccgtgtgggacgggaatgga
ctttccaagtgctacggcaacattctgttagcttttggtcctaatatagtcactcttgct
gtgattttcgtactcggaatcactccaaggaccggcagaagaacctggaggatgaacttt
tccgagaggtttttcttgcacgtgcttcctgccgtcggagcttgttcagcatttttcgac
attgctttacttttaaagaaaggtcgtggtggtgtcttggttgcaaaacatgaatggttg
ttcagatgttcccagtttgctgtctggacagttgtcatactcttctcaaggtgtttcaat
gcttgccatatttttggcaatcgcatcttgtgtttctggtggcttgtaaaaatacttttg
gcaacacttcatttgttcacaacatatccttcattcaaggtcttgttatctcttaaggag
attggtactgtttcattggacgtcgtttttggtatatcaattaacatcatcagaatgaag
agggcatcatccaacagaagttcaatggaagattcactactttctgctgacatggacctc
gaggaaggttctctcaaggactctggcgacaatcagagctatttcaatcttatgacattc
agatcgatcacttctgtgatgagtcatggtgtcacaaagcagcttgaatttgaagatttg
cttcaacttcccactgatatggacccttgttcctgtcatgatgcattatttagctgttgg
aaatcccaacagagtagttgccctgatccatccctgtttagggcaatctgttctgcatat
ggatggccatacgttcgtctcggcttgttaaaggtacttaatgattctgttggttttgct
ggaccgttgcttctcaataagctaattcgcttccttcaacaaggttcgcagaatttggat
ggctatgttcttgctgtatccttgggcctcatatctatctttaaatcgtttttggataca
caatatacttttcatctttcaaaattgaagttaaagctacgatctagtatcatgacagtt
atatatcagaagtgcctctgtgtcaacctagcagagcgatcaaagtttaccgagggggaa
attcagacattcatggccatagactctgatcgcattgtcaacttaagtaacactctccat
gatatgtggagcttgcctttacaaattggggtggctttgttccttttgtatacacaagtc
aaatttgcatttgtttctgggcttgcaattaccatcgcattaataccagtgaataaatgg
atatctacattgattgcaagagctacagtgaaaatgatgaagcagaaggatgagaggatc
agaaggacgggggaacttttgacatatatccgcactttgaaaatgtatggttgggagctc
ttgttttctagctggttgatggagacaagattatcagaagttatgcacttaactacacgg
aagtacttggatgcctggtgtgtatttttttgggccacaacaccaactcttttttctctt
tgtacatttggacttttcacattgatggggcatcaacttgatgctgcaacggtcttcact
tgtgttgctctgtttaatactttgatatctcctctaaactcatttccgtgggtcattaat
gggttaattgatgctgtcatatctgtcagacggttgagcaggttcctgtcttgctctgag
cgcaagtcaaagctggaaaagacagctgatgcatcttcaccatatttctccaatgatcag
tgtgaatttacctttgaagatatggctgttgtgtttgatgattcatcttgttcctggtca
agcagcgatgaaaaggaattgaatttggtgctgaatcatgtaactctaggtattccaaag
ggttccttcattgcagtaattggagaggttggttcaggtaaatcatcattgttgaattcc
atattgggggaaatgcaacttgtccatggatcagtatattcttgtggatctatagcatat
gtaccacaggtcccatggattctgtctggaacaatccgtgacaatatactgtttggaaag
caatatgatcccaaaagatacacagatactttagaggcaagtgctttagacgttgatatt
tcaataatggttggaggtgacatggcttatattggagaaaaaggagtcaacttgtcaggt
ggacagagagctcgaattgctctggcaagggctatttataatggctccgatatgtttatt
cttgatgatgtcctcagtgcagttgatgcaagagttgctcgttgtattttatacaatgca
attttgggtccactaatgaaaaagcaaactcgtgtgctttgtacgcataacgttcaggca
atatcttctgctgatacaattgtggttatggaaaaaggacatgtaaagtgggtgggacct
tctgcttgtttgccagcttcttcatattcagcattctctccactgaatgaatttgataaa
ttcttactgaatgaaggaaaagagtgcaatgtacctgcagattctctcacaaaagaccaa
caaaaccttcccttagagaaagatattgtgcctgcttcagagggaagacaagatattatt
gaagttgaggcacggaaagagggaaaagtagaactttctgtctacaagaattatgccacg
tttactggttggttcatttcggttgtaatatttctgtcagcaatcctaatgcaagcttct
cgtaatggaaatgatctgtggctgtcatattgggttgatacaacaggaaagagtcagaaa
ggatactctacatccttttatctggtaatactgtgcatcttttgtactgcaaattcagtt
cttacattagtgagggccttctcatttgcatatggcggcgtacgagctgcagttaaggtg
catgatacactgctgaaaaggcttatcaatgcacctgttcaattctttgatcagacacca
ggtggaaggatactaaacaggctatcttcagatctatacacaattgatgattctcttccc
ttcattctcaacattctcctagctaatttcgttggtcttctgggaattgcaatagttttg
tcatatgttcaggtcttcttcttgcttttgctattaccgttttggtatatctacaccaaa
cttcagttcttctacaggtcaacatctcgagaattgcgaaggctggacagtgtgtctcgg
tctcccatatatacatccttcacagagacacttgatggatcatcaactatacgggcattt
aagtctgaggacttctttttggccagattcactgaccaggtgaaattgtatcaacaaact
tcctacacagagttaaatgcaagtttgtggctttccctacgtcttcagttgtcagcagca
tttatcatctcatttgttgctattatggctgttcttggatctcatggtggattaccaatc
ggtttcagtaccccagggctggttggtttggctctatcttatgcagctccggttgtaaat
ttactgggaagctttttgacaagtttcactgaaacagagaaggaaatggtttccattgaa
agagctcttgagtatatggaggttcctcaagaagaagttgatggacttcaatctttaaac
tgcaattggccatttcaaggacggattgaattccaaaatgttaccttgagatacaagcca
tcttttccagctgcactttgtgatattagttttactattgacggagggatgcaggttggt
attgttggaaggacaggagctggaaaatctagtgttttgaatgcccttttccgcctcaca
ccaatatgcacaggatgtattcttgtggatgatataaacatagctaatgctcctatcagg
gatcttcgtgggcatttctctgttgttcctcagactccatttttatttgaaggatcatta
agggacaatctggatccattcaggctgagtgatgactataaaatttggaaggctttggag
aggtgccatgtcaaagaggaagtagaagcagcaggaggtttagatattcacctaagcgaa
tctaggatgtccttttctgtagggcaacggcagcttctttgccttgtacgtgcactgctc
aaatcttcaaaggtgctttgtttggatgaatgcacagctaatgtggacactcaaacagca
tctaccttacaaaaaaccatatctagtgaatgcagtggcatgacagttatcacaattgct
catcgtatttccaccattctgaatatggataatgtcctgatcctcgaccatggtatcctg
gttgaacaaggaaatccgcaggctctcctacaaaatgagttctccagattttccagtttt
gctaaagcatctacaatgtga

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