Rosa chinensis (China rose): 112187607
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Entry
112187607 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112187607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112187607
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
112187607
Membrane trafficking [BR:
rcn04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
112187607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
COMMD9_HN
Motif
Other DBs
NCBI-GeneID:
112187607
NCBI-ProteinID:
XP_024182243
LinkDB
All DBs
Position
2:complement(88264564..88272878)
Genome browser
AA seq
1030 aa
AA seq
DB search
MATTTPRLLFFFFCVLISVADSKFMVYNTSQGIVAGKLNVHLVPHTHDDVGWLKTVDQYY
VGSNNSIQGACVQNVLDSLIPALLADKNRKFIYVEIAFFQRWWRDQSDAVQRIVTDLVSS
GQLEFINGGMCMHDEAATHYVDMIDQTTLGHRFIKREFDVTPRIGWQIDPFGHSAVQAYL
LGAQVGFDSLYFGRIDYQDREKRKNDKSLEFVWQGSKSLGSSAEIFSGAFPENYEPPSGF
YFEVNDKSPIVQDDITLFDYNVQERVNDFVAAAVSQANITRTNHIMWTMGTDFKYQYAHT
WFRQMDKLIHYVNKDGRVNALYSTPSIYTDAKYATNESWPIKTGDFFPYADRINAYWTGY
FTSRPALKHYVRTMSGYYLAARQLEFFKGRSTSGPNTDSLADALAIAQHHDAVTGTEKQH
VANDYXKRLSIGYMESEQLVATSLAHLVESASYTGSGNPTTKFQQCLLLNISYCPASEVT
LSQGKKLIVVVYNSLGWKRDDTVRIPVINEDVIVHDSEGKAIESQLLPLDDVHLGLRNYY
VKAYLGQTPTKTPKYWLVFTVSVPPLGFSTYTISGAEGAGASSTRSSVYTFQSREKSTIE
VGQGNVKLSFSTEQGKMTNYVNSRSLVEESVQQSYSFYNGYNGSNDKAPLIPQNSGAYVF
RPNGTFLITPEEKASLTVIRGPVIDEVHQQINSWIHQITRLHKEKEHVEVEFIVGPIPTD
DGIGKEVVTQLDTAMATNKTFYTDSNGRDFIKRIRDYRTDWDFKVNQPVAGNYYPINLGI
YMQDNRTEFSVLVDRSLGGSSTVDGQIELMLHRRLLLDDSRGVAEALNETVCVSDECTGL
RVLGKFYFRIDPLGDGAKWRRSFGQEIYSPLLLAFAEQDGDNWKNSHATTFSGIDSSYSL
PDNVALITLQELDDGKILIRLAHLYEVGEDKDFSVMANVELKKLFPRKKIGKATEMNLSA
NQERTEMERKRLVWKKEGGSSGTEKGVRGGPVDPAKLVVELAPMEIRTFLIDLEQKFFHR
RHHHHDVSDV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgactcctcgtttactcttcttcttcttctgtgtgcttatctcggtcgct
gactccaaatttatggtctataacacctcccaagggatagtcgccggtaaacttaacgtc
cacttggtccctcacacccacgacgacgtcggatggttgaagaccgttgatcagtattat
gttggctccaacaattccatccagggggcttgtgtgcaaaatgtgttggactctttgatt
cctgctctgttggctgacaagaatcggaaattcatctacgttgaaattgcctttttccag
cgctggtggagagatcagagtgatgccgtccagcgtatagtcacggaccttgtcagctcg
ggtcaactagaattcataaatgggggcatgtgtatgcatgatgaagcagctacgcattat
gttgacatgattgatcagaccactcttgggcatcgctttattaaaagggaattcgatgtg
actccaagaattggatggcaaattgatccttttggacattcggctgtccaggcctacttg
ttgggagcacaagttggattcgactcactttactttggtcgaatagattaccaggacagg
gaaaaacgcaaaaatgacaagagtcttgagtttgtttggcagggttctaagagtctcggt
tcatctgctgagattttttctggtgctttccctgagaattatgaacctccctctggtttc
tattttgaagttaatgataaatccccaatagtccaggatgacatcactttgtttgattac
aatgttcaagaacgagttaatgactttgttgctgctgcagtatcacaggctaacataact
cgaacaaatcatattatgtggaccatgggaacagacttcaagtatcagtatgcacacacc
tggttccgtcaaatggacaagctcattcattatgtcaacaaggatggacgtgttaatgct
ctgtactctactccttccatatatactgatgcaaaatatgctacaaatgaatcttggcca
atcaagactggtgacttctttccttatgcagatcgcattaatgcttactggacaggatac
ttcacaagcagaccagccttgaaacactacgttagaacaatgagtggctattatttggct
gctaggcaactagaattttttaaaggaaggagtacttcagggcccaatacggactcattg
gcagatgccttagcaattgctcaacatcatgatgctgtcactggtacagaaaagcagcac
gttgccaatgattatngcaaaagattgtcaataggatacatggagtctgagcaactagtt
gcaacttcacttgctcacttggttgagtctgcatcatatactggatctggaaacccaact
acaaagtttcaacagtgtctacttctgaatataagctattgccctgcatcagaagtaact
ttgtctcaggggaaaaaattgattgttgtggtgtacaattctcttggatggaagagggat
gacacagtccgaattcctgttatcaatgaagatgtcattgttcatgattctgagggaaaa
gcaatcgagtcacagcttcttcctctagatgatgtccatctgggcttaaggaactactat
gttaaggcatacttgggtcaaactccaacaaagacaccaaagtattggcttgtgtttaca
gtatccgtaccaccacttggttttagcacatacactatctcgggtgccgaaggggcaggt
gctagctcaaccagatcatctgtatacacctttcaaagcagagaaaagtcgactattgaa
gttggtcaaggaaatgtgaaactctctttttccacagaacaaggcaaaatgactaattat
gtcaatagcagaagcttggtggaagaatcggttcagcagtcttacagcttttataatggg
tataatggcagtaatgataaggctccactgattcctcagaattctggggcatatgttttc
cggcctaatggaacatttctcataacacccgaagaaaaggcttctttgactgttatacgt
ggaccagtaatagatgaagtacatcaacagattaattcgtggatacatcagatcactaga
cttcacaaggaaaaggagcatgttgaagttgagtttattgttggccctatacctactgat
gatggaattggaaaagaagttgtaactcaattagacactgccatggctaccaacaaaacg
ttctacactgattctaatgggcgtgattttatcaaaaggattcgcgactatagaacagat
tgggacttcaaagtgaaccaacctgttgctggaaattattacccaattaatcttgggatt
tacatgcaagataataggacagaattttcagttttggtggatcggtcactagggggatcc
agcacagtggatggtcagatagagctgatgcttcacaggagactactacttgatgactca
agaggtgttgccgaggctctaaatgaaactgtctgtgtttccgatgaatgcacaggacta
agagtcctagggaaattttacttcagaattgaccccttgggagatggtgctaagtggcgt
cgttcttttggccaggagatatattcacctcttctcctagcctttgctgaacaggatgga
gataactggaagaattctcatgcaaccactttttctgggattgattcctcgtatagttta
cctgataatgttgctcttataactcttcaggagcttgatgatggaaaaattctcattcgc
ttagcacatttatacgaggttggagaggacaaggatttttctgtaatggcaaatgtggag
ctgaagaagcttttccccaggaagaagattggcaaagcaacagaaatgaacttatcagct
aatcaagaaaggactgaaatggagagaaagagactggtatggaaaaaggaagggggctcg
tcaggaacggaaaagggtgtgaggggtggacctgttgatcctgcaaaactagttgtggaa
cttgccccaatggaaatccgcaccttcctcattgacttggagcagaagttcttccaccgc
cgccatcatcatcatgatgtatctgatgtataa
DBGET
integrated database retrieval system
