Rosa chinensis (China rose): 112187641
Help
Entry
112187641 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112187641
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112187641
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112187641
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112187641
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112187641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
112187641
NCBI-ProteinID:
XP_024182285
LinkDB
All DBs
Position
2:complement(23172319..23177775)
Genome browser
AA seq
879 aa
AA seq
DB search
MPALGMLGFQGLLFGVVLAAFFVIRHKWRNAVAKKEEIMRLVAMASEEAAMAEFQATTAM
YAAAPPVVVAPVTSPFHCAVCYSQTTMRCSKCKSVRYCSGKCQIIHWRQGHKDECRPSIG
TMEVQHNSDIDEEAVLHRGGIGAHTSATSPSTISWDGFTSSGTGADTSSGEILNHVSVDR
AEKPLFDGTAPDLLGNMSEYTNLVNCRDNFSPANKLVKMKSSHNDKEVESESKLAKAKID
MSADAQPANFAGKKPTRRGTSIEKVVTDAFKSKRLSTSDREDERKEGPLSNSGSNGRPSS
TTGGLLDSSYRSEKVDGYHALPAKIGSTPSLPQNACNGLKTSMKKVVQQFKSSKQLKSNL
SGPENGIAGKFKVIFPYELFVKLYSYNNVDLCPFGLTNCGNSCYANAVLQCLAFTQPLTS
YLLQGLHSRACQKKDWCFICEFEILLLKAREGKSSLSPIRILSRIHKIGSHLGHGKEEDA
HEFLRYAVDTMQSVCLKEAGAIGPLAEQTTLVGMTFGGHLRSKIKCMKCLGKTEQFERMM
DLTVEIDGAIGTLEEALAQFTATETLDGDNRFHCNRCKSYEKARKKLTVLEAPNILTIVL
KRFQSRNFEKLDKSVRFPEVLNLSPYMDRTSDKSPLYNLYAVIVHLDIMNAAYSGHYICY
VKNSQGNWFKINDSSVEPVELKRVLSEGAYMLLYARRSPRPPPLVGSNALSHAGTSNRRN
SEAVPSSLTKSKLRYTVPSMNSSAAQPKSSREWYRMSFDGSSNQSLDPDDWRSHSMYRVP
AMDSLSESSSIFSSSDASSCSTVSTKDSSSNEDLSDYIFGQVGTNPYSQFRRSSDVVAPS
LFPNFDVDMKGRTADSEGGGNSTILCSDRSRHRRKSTSD
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgccggccctcggaatgctagggtttcaggggcttctgtttggggtcgttttggcggcg
ttctttgtgattcgccacaagtggaggaatgcggtggcgaagaaggaggagatcatgagg
cttgtggctatggcttccgaggaggccgcaatggccgagtttcaggccaccacggctatg
tatgctgctgctcctccggtggtggtggcgccggtgaccagtccgtttcactgtgctgta
tgttattcccaaaccaccatgcggtgctcgaaatgcaagagtgttagatactgttctggg
aagtgtcaaatcattcactggagacaaggtcacaaggacgaatgccgaccttcgattggc
accatggaggtgcaacacaacagtgatatagacgaggaagcggtgcttcatcgtggtgga
ataggtgcacataccagtgcaacctcacccagtactatatcatgggatggcttcacttca
tctggtactggagctgacacctcttcgggtgagattcttaatcatgtcagtgttgacaga
gcagagaaacctctttttgatggtactgctcctgatctacttggaaatatgtcagagtat
actaatttggtaaattgtcgagataacttttcacctgcaaataagttagttaagatgaaa
tccagtcacaatgataaagaggtagaatctgaatcaaaattggccaaagctaagatagac
atgtctgctgatgctcagcctgcaaattttgctggtaaaaagccaactagaaggggtact
tcaatagaaaaggtagttactgatgcctttaagtccaagaggttgtcaactagtgacagg
gaagatgagcgtaaagagggacctttatcaaatagtggttctaatggccggccatcttca
accactggagggttactggattccagttatagatctgaaaaagttgacggttatcatgcc
ttgcctgccaaaattggtagtaccccaagcttgccgcaaaatgcttgtaatggtctgaag
acatccatgaagaaagttgtgcagcagtttaaatcctcaaaacagctgaaatccaatctc
tcaggtcctgaaaatgggattgctggaaagttcaaggtaatatttccatatgagctattt
gtgaaactgtactcctacaacaatgtggatctttgcccatttggcctgacaaattgtggg
aacagctgttatgctaatgctgtgctacagtgtttagcatttactcagcctcttacttcg
tatcttcttcaaggactccattctagagcatgtcaaaaaaaggactggtgctttatatgt
gaatttgaaattctgctcctgaaggcaagggaagggaagtcttcactgtccccgattagg
atcttatccagaatacataaaattggaagccatcttggtcatgggaaggaagaagatgct
catgagtttttgaggtatgcagttgatacgatgcaatctgtttgcctcaaggaagctggg
gctattggtcctttggcagaacaaacaactctagtaggcatgacctttggaggtcacctt
cgatccaagataaagtgcatgaagtgcctcgggaaaactgagcaatttgagcggatgatg
gatcttactgtcgaaattgatggggcaattggaactctggaagaggctcttgcacaattt
actgctactgaaactttggacggagataataggttccattgtaacaggtgtaaatcttat
gagaaagccagaaagaaacttacagttctagaggcaccaaatattcttacaatagtgttg
aagcgatttcagtctcgaaacttcgagaagctggataagtcagtacgttttccagaggtt
ctcaacttgtcaccatacatggacagaacaagtgataaatctcctttgtacaatctttat
gccgtcattgttcatctggatattatgaatgctgcatattcaggccattatatatgttat
gtaaagaatagtcaaggcaactggttcaagattaatgacagctcggttgaacccgtggaa
ttaaagagggtcttatctgaaggcgcatacatgcttctttatgcaaggcgctctccgcga
cccccacccttggtaggaagtaacgccctttctcatgctgggacatccaatagaaggaac
tcggaagcagtcccttcaagccttaccaagtccaagttgagatacacggttccaagtatg
aatagttctgcagcacaaccaaagtctagtagagagtggtacaggatgagttttgatggt
tcaagcaatcaatcattagatccagatgattggagatctcattccatgtacagagttcct
gctatggattcattaagtgagagttcatcgattttcagctcctcggatgcaagttcttgt
agcaccgtgagcaccaaggactcctccagcaatgaagatctctctgattacatatttggt
caagtaggaacaaatccgtacagccaattcaggcgttcatcagacgtggttgcaccttcc
ttgtttccaaactttgatgtagatatgaaaggccgtacagcggactcagaaggcggagga
aactccacaattttgtgtagtgacagaagtagacatcgcaggaagtcaacctcagattaa
DBGET
integrated database retrieval system
