KEGG   Rosa chinensis (China rose): 112187650
Entry
112187650         CDS       T06020                                 
Name
(RefSeq) ras-related protein Rab5 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn04144  Endocytosis
rcn04145  Phagosome
rcn04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112187650
   04145 Phagosome
    112187650
   04148 Efferocytosis
    112187650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112187650
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcn04147]
    112187650
   04031 GTP-binding proteins [BR:rcn04031]
    112187650
Membrane trafficking [BR:rcn04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    112187650
 Endosome - Lysosome transport
    112187650
Exosome [BR:rcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112187650
  Exosomal proteins of other body fluids (saliva and urine)
   112187650
  Exosomal proteins of colorectal cancer cells
   112187650
  Exosomal proteins of bladder cancer cells
   112187650
GTP-binding proteins [BR:rcn04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    112187650
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA TsaE RsgA_GTPase SRPRB MMR_HSR1 AAA_16 ATPase AAA_24 PduV-EutP
Other DBs
NCBI-GeneID: 112187650
NCBI-ProteinID: XP_024182298
LinkDB
Position
2:complement(4356489..4358947)
AA seq 199 aa
MARTGNKNIQAKLVLLGDMGAGKTSLVLRFVTGKFLEYQESTIGAAFFTQVLSLNEATIK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMESFIRAKKWVFELQRQANPTLIMFL
AGNKADLEEKRKVGSEEGEQYAKENGLVFLETSAKTAQNVNELFYEIAKKLAKATPSRQT
GIKLHSRSQPSSRRYCCSV
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcaagaacaggcaataagaacatacaagccaagctggtgcttcttggggacatggga
gctgggaaaacaagtttggtattgagatttgtcacaggaaaatttttggagtaccaggaa
tcaactattggagcagctttctttactcaggttctgtcattgaatgaagctaccataaaa
tttgatatatgggacacagcaggtcaggaacgttaccatagcctggctccaatgtattac
cgcggcgctgctgcagctgttgtggtctatgatatcacaagcatggagtcatttatacga
gcaaagaagtgggtttttgaattgcaaagacaagcaaatccaactttaataatgttctta
gctggaaacaaggctgacttggaagagaagagaaaagtagggtctgaggaaggtgaacaa
tatgctaaagaaaatggcttggtatttcttgaaacatctgcaaaaactgcacagaatgtg
aatgagctcttttatgaaatagcaaaaaaattggctaaggctaccccctctcgtcagact
gggataaaattgcacagcagatcacaaccaagcagcaggagatattgttgctctgtatga

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