Rosa chinensis (China rose): 112187657
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Entry
112187657 CDS
T06020
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00900
Terpenoid backbone biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112187657
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcn01006
]
112187657
Enzymes [BR:
rcn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112187657
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112187657
2.5.1.29 geranylgeranyl diphosphate synthase
112187657
Prenyltransferases [BR:
rcn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112187657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
112187657
NCBI-ProteinID:
XP_024182306
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All DBs
Position
2:14181264..14182904
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AA seq
363 aa
AA seq
DB search
MSCVNLSSWGQTCSMLNRSRSPSLHLLHSLRARPVSFASPKGRRPSSVTAILTKQETVKE
QKEESGKPSFNFKTYMVEKAESVNRALDAAVSLKDPITIHEAMRYSLLAGGKRVRPVLCV
AACELVGGSESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLA
GDALLSFAFEHLAVSTVGVEPSRIVRAVEELARSIGSEGLVAGQVVDIHSEGLSDVGLEH
LEYIHLHKTAALLECAVVLGSILGGGSDSEIEKLRTFARYIGLLFQVVDDILDVTKSSQE
LGKTAGKDLVADKVTYPKLMGIEKSKEFAEKLNRDAQEQLVGFDQEKAAPLIALANYIAY
RQN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtgtgaatctgagctcatggggccaaacctgttcaatgttgaaccgatccaga
tccccatctctccacctcctccacagcctcagggcccgacccgtttccttcgcttctccg
aaaggacgccgacccagttccgtcacggcaatcctgaccaagcaggagactgtgaaggag
cagaaagaggaatccgggaagcccagtttcaatttcaagacctacatggtggagaaggcc
gagtccgtcaaccgggccttagacgccgccgtttcgctgaaagacccgattacgatccac
gaagcgatgcggtactctttgctcgccggaggcaaacgggtccgacccgttctgtgtgtc
gccgcgtgcgagctcgtcggaggttctgagtccctcgccatgccggcggcctgcgccgtc
gagatgatccacaccatgtcgttgatccacgacgacttgccgtgcatggataacgacgac
ctccgccgcgggaagcccaccaaccacaaggttttcggcgaagacgtcgccgttttggcc
ggcgatgcgcttctatcattcgcgttcgagcacctcgccgtctccaccgtcggcgtggag
ccttctagaatcgtccgagccgtggaggagcttgcccggtcaatcgggtcggagggattg
gtggcgggtcaagtcgtggatatccactcggaggggttatccgatgtgggactggagcac
ctggagtacatacacctccacaaaacggcggctcttcttgaatgtgcagttgttctcggg
tcgattttgggaggcgggtcggactcggaaatcgaaaagctccggacttttgcgaggtac
attgggctgttgtttcaagttgtggatgacattctggatgtgacgaagtcttcacaggaa
ttggggaagactgctgggaaggacttggtggctgataaggtgacttatcctaagctaatg
gggattgagaaatcgaaggaatttgcggagaaacttaatagggatgcacaagaacagctc
gtcggattcgaccaggaaaaggctgctcctttgattgctttggctaattacattgcttac
aggcaaaattga
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