KEGG   Rosa chinensis (China rose): 112187735
Entry
112187735         CDS       T06020                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112187735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112187735
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     112187735
SSDB
Motif
Pfam: HD HD_assoc_2 LMSTEN
Other DBs
NCBI-GeneID: 112187735
NCBI-ProteinID: XP_024182407
LinkDB
Position
2:complement(85054761..85059341)
AA seq 472 aa
MGAYSNDGVLLSPIYSLSSGQDLRSSKHVYDNVHGNIYLDPLSLKFIDTEEFQRLRDLKQ
LGVTNSVFPGAVHSRFEHSLGVYWLAGEAVQRLKNYQGLELDIDRFDLQTVKIAGLLHDV
GHGPFSHLFEREFLPRVESGSHWSHEDMSVKMIDHIVNQHHIDIDPEMIKRVKEMILASE
NANAKSSREKPFLYEIVANGRNGIDVDKFDYIVRDSRACGLGCNFEFRRLMETMRVLDDE
ICYRAKDYLTVHKLFVTRADLYRTVYTHPKVKAIELMVVDALVKANDYLQISSHIEDPAE
YWKLDDSIIRTIETAPNEELKEARDLILRIRRRNLYQFCNEYAVPKEQVEHFKNVTAQDI
VCSQTNGGVILKEEDVAVTNIRIDLTRGSQNPLQSINFFQDYESKEKFPIRDDRISHLLP
TSYQDLIVRVYSKKPELVGPISEAFENFQVKTYGVKAQVHPTPEKKKRPRGF
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggggcttacagcaacgacggcgttttgttgtctccgatatacagtttgagttccggc
caagacctccgttcctccaagcacgtctacgacaatgtccacggcaacatttacctcgat
ccgctttctttgaagtttattgatactgaggagtttcagaggcttagagacctgaaacaa
ctcggagtgacaaactcagtttttcctggggctgtgcattccaggtttgagcattcgctt
ggtgtctattggcttgctggtgaagctgttcagaggctcaaaaattatcagggtctcgaa
cttgatattgaccgctttgatctccagacagtaaaaattgcaggtctattgcatgatgtt
ggccatgggcctttcagtcacttgtttgaacgggagtttcttccacgggttgagagtggt
tcccattggtctcatgaggatatgtcagttaagatgattgaccacattgttaatcagcat
catattgatattgaccctgagatgattaaaagagttaaggagatgatacttgcttctgaa
aatgccaatgcaaaaagctccagggagaagccttttctgtatgaaattgtggcaaatggc
cgtaatggtattgatgtggacaagtttgattatattgtccgtgacagccgagcttgtggg
ctgggatgtaattttgagtttcgaagattaatggaaacaatgcgggttttggatgatgag
atctgctaccgtgctaaagactatctcaccgtccacaaattatttgtcactcgggcggat
ttgtatcgaacagtttatacacatccaaaagtaaaggccatagagcttatggtggtggat
gccctggtgaaagcaaatgattatctacaaatatcatctcacattgaggatccagctgaa
tattggaagttagatgactcaataatcagaactattgagacagctccgaatgaagagcta
aaggaggctagggacttaatcctgcgcattaggaggagaaatctctatcagttctgcaat
gagtatgctgtacccaaggagcaagtggaacatttcaaaaacgtcactgctcaagatatt
gtttgttctcagacaaatggaggtgttatattgaaagaggaggatgttgctgttaccaac
atcaggattgatttgactcgcggaagtcaaaatccccttcaaagcatcaactttttccag
gactatgagagtaaggagaaattcccaatacgtgatgatcgcattagtcacttgctgcct
acatcgtatcaagatttgatagtgagggtctattcaaaaaagcctgagctggttgggcca
atctctgaggctttcgaaaatttccaggtaaaaacatatggggtcaaggcacaagtacat
cccacaccagagaaaaagaaacgccctcgtggtttctaa

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