Rosa chinensis (China rose): 112187742
Help
Entry
112187742 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112187742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112187742
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112187742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_3
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112187742
NCBI-ProteinID:
XP_024182415
LinkDB
All DBs
Position
2:complement(73191265..73195930)
Genome browser
AA seq
838 aa
AA seq
DB search
MDIEEVPDFSVTTPDYISQGSLGQNPISVTPVTPMRKAWSKVTLIWDIYSAGTTIMVKII
FSRVIRSIHEILSWKWIFVVSCIAVSLDPLFLYIPIIEGNKCLGTDRNLRIVTLVLRSLI
DITFITHIIGLISDWKYSDGPQRHVSYFDSHFEPASGLLWKLKFLKQAIAKRMPWLSGTV
MIHFLAILPIPQVAIVYVFARIGSSEFFLKTAIINLFLVFQYFPRVCQIYLSSKKLNMTG
TWVKGGFNLFLYILASHVIAAYWYFFAIQREISCWHQACEKSAGCLATYVCGGSTSMNIT
FQNELCPIFSPNTTLFDFGIFLDILQSGNAGSVNFLTKFCYSLWWGLKNLSSFGTNLETS
SYWWENCFAILICVVGLVLFLHLVGNVQTYMQFQTTKSASIADSRRTRIKAKYRDINKWM
SKHGLPADMKTAIRKDIKEWNIAGRYIDHDVDVRFVNNICGGNIVLVLSEFFRLNALKKV
PMLQNVPEFGLILISQYLYLETYDENAVVARAGKPIDSMFFIIDGVIDWTDETNMDTDAE
TTGSSSSSNSSKLKNGDYFGQELLSWAAFNYGSSYFSPVPTSTRDAKCRTKVEVLQLSRG
TLVNTEVCDYMPQSDSLAHLEELAVPHNHIDQIIDEYPVPKVKWKCPYRGWLKVNCSAVW
ERESRVAGMAWVCRKDEGAFVAAGSLGGIRCMDRFFAEALSIAKAIEFCTTIISDVSGDN
VGRIIVESDNQDLMDCLLQLHDEDLVVPKTYLNNSSLEPNNRIGENLRPILGDIFIRLAP
GFKAITYVHCDSQCNAAAHCVASHAMDDATDSSSWYGPDPAPRWLIPALTKDSPHLYT
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggaggtcccagacttcagcgttacaacaccggattacatttcacagggt
agtttagggcaaaatccgatttctgtaactccagtaactccaatgaggaaagcatggtca
aaagttactctaatttgggatatatattcagcaggaacaactataatggtgaagataata
ttttcaagagtaattcgctctatacatgaaattctaagttggaaatggatatttgtggta
tcatgcattgcagtctcattggatcctttgttcctttacattccgatcatcgagggaaac
aagtgccttggaaccgacagaaatttgaggatagtaactctagttctccgatcacttata
gatatcactttcataactcacattattggtctaatttctgattggaaatactctgacggc
ccccaaaggcacgtctcctacttcgactctcactttgagccagcatcaggcttgctttgg
aaactaaagttccttaaacaagccatagctaagaggatgccatggttatctggtactgtc
atgatccactttcttgctattcttcctatcccacaggtggcaatagtatatgtctttgct
cgaattggaagctctgaattttttctcaaaactgcgattatcaacttatttcttgtcttc
caatatttcccgagggtttgccaaatctacctatcaagtaagaaactcaacatgaccgga
acatgggttaaaggtggattcaatttgtttttgtatatccttgcaagtcatgttattgca
gcctactggtatttttttgcaattcagagagagatctcatgttggcaccaggcgtgtgaa
aaaagtgcaggatgcctagcaacttatgtttgtggtggcagtacttcaatgaatatcaca
ttccaaaatgagctatgcccaatattttcaccaaatactacattatttgattttggaata
tttcttgatattcttcagtctggtaatgcaggatcagtaaatttcttgacaaaattctgt
tactctctatggtggggactaaaaaatctaagtagttttggcacaaatctcgaaacaagt
agctattggtgggaaaattgttttgcaattcttatttgtgttgttggcttggtattattt
ttgcacctcgttggaaatgtacagacatatatgcagtttcaaactacaaaatctgcgagc
attgctgattcaagacggactaggattaaagcgaagtatcgagatattaataagtggatg
tcaaagcatggtctccctgcagatatgaagacagcaatcaggaaagacataaaagaatgg
aacatagccgggagatacatagatcatgatgtggatgttcgatttgtcaataacatttgt
ggaggaaacatcgtattagtcctgtcggaatttttccggctaaatgctctaaagaaagta
cccatgcttcaaaatgtgccagagttcgggttgatacttatcagccaatatctctatcta
gaaacctacgatgagaatgcagttgttgcccgagcaggaaaaccgattgattcgatgttc
ttcattatagatggcgtgattgattggactgacgagactaacatggataccgatgctgaa
accacgggttcttcttcctcatctaatagcagcaagcttaagaacggtgattattttgga
caagaacttttgagttgggcagcatttaactatgggagctcttattttagccctgttcct
acttcgactcgagatgccaaatgtcgaacaaaagtagaagtcctgcagctgagtaggggg
accttagtaaatacagaagtctgcgattacatgcctcagagtgattctctggcgcacttg
gaggagttggcagttccccataaccacattgatcagataatagacgagtatccagttcct
aaggtgaaatggaaatgtccttaccgtgggtggctgaaagtgaactgtagtgctgtgtgg
gaacgtgaatcaagagtggcaggcatggcttgggtttgcaggaaagatgaaggagctttc
gtggccgctggaagtcttggtgggataagatgcatggacaggtttttcgctgaagctctc
agcatcgctaaggctatcgagttttgtaccactattattagtgatgtttctggcgacaac
gtcggccgcataattgtggagtctgataaccaggatctcatggattgcttgcttcagctg
catgacgaggacctagttgtaccgaaaacatacttgaacaactctagcttggaaccgaat
aaccgtattggcgaaaaccttcgaccaatccttggggatattttcatccgcttggctcca
gggtttaaggctattacttacgtgcattgtgatagccaatgtaatgcagctgctcattgc
gtagcatctcatgctatggatgatgctactgattcttcatcttggtatggtcccgatccg
gcccctagatggctaattcctgctctcacgaaggatagcccacatttgtacacatga
DBGET
integrated database retrieval system
