Rosa chinensis (China rose): 112187782
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Entry
112187782 CDS
T06020
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112187782
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112187782
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
112187782
NCBI-ProteinID:
XP_024182476
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All DBs
Position
2:82109622..82114079
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AA seq
476 aa
AA seq
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MSTSGTPQFRYTQTPSKVLHLRNLPWECAEEELIELCKHFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDADTASAARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGVVQPAVGPDGKKKEM
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDIATAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAVQSGYPAAPAAWQN
AQAAPVYHGNEYSAAAAGPGQGPPGQVPSWDPNMQAGRSSFVSVPSTFPGQTFPTSSGGP
VYSSAPMPAGSSPPITSGVDPRGMHQPGAPPHVRPGGASPPGVRPPGASPSYYGQS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcggggacaccgcagttcaggtacacgcagacgccgtcgaaggtgctccac
ctccgcaatctcccctgggagtgcgccgaggaggagctcatcgagctctgcaagcatttt
gggaagatcgtcaataccaagtgcaacgtcggcgccaatcgcaaccaggccttcgtcgaa
ttcgcagacctaaaccaggccataaacatggtttcatattatgcttcatcgtcagagcct
gctcaggtccggggtaaaacagtttacatccagtattcaaatagacacgaaattgtgaac
aacaaaagccctggagatgttcctgggaatgtgttgctggtaaccatcgagggtgttgaa
gctggtgatgtgagcattgatgtcattcacttggtgttttctgcttttgggtttgtgcac
aagattgctactttcgaaaaggctgcaggcttccaggcattgattcagttcagtgatgct
gacactgcatctgcggctaggaatgccttggatggaagaagtatacccaggtacttgctt
cctgagcatgtcggttcatgccacttgcgtatctcgtattctgcacacactgatctgaac
atcaagttccagtcacacagaagcagggattatacaaatccataccttcctgtaaatcct
actgcaatagagggagttgtgcagcctgcagtaggtcctgatggaaagaagaaagagatg
gagagtaatgtgcttctggcttccattgaaaatatgcagtatgctgtcactgtggatgtt
cttcacacggtattttcagcgtttggcacagtacaaaaaattgctatattcgagaagaat
ggtcaaacacaggcattagttcaataccctgatattgctaccgcagctgttgccagagaa
gctctagaggggcactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgacaaaagtagagattatacaatccca
gatgctagtttgcttgcggtgcaatctgggtaccctgcagctcctgcagcctggcagaat
gcgcaggctgctccagtgtaccatggaaatgaatacagtgctgcagcagctggaccgggt
caaggtcctcctggacaagtgccatcatgggatccaaacatgcaagcaggccgatcatcc
tttgtttcggttcctagcacctttcctggtcagacatttcctacatcatcaggtggtccg
gtatattcctctgcaccaatgcctgcgggttcatcacctccaattacttcaggtgtggat
ccaaggggaatgcatcagccaggtgctccaccgcatgtgcgaccaggtggtgcttcaccc
ccaggcgttcgacctcctggtgcttcaccttcttattacggccaatcctaa
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