Rosa chinensis (China rose): 112187878
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Entry
112187878 CDS
T06020
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112187878
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112187878
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Helicases
112187878
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
112187878
NCBI-ProteinID:
XP_024182962
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All DBs
Position
1:complement(60389256..60393087)
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AA seq
594 aa
AA seq
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MDTASPYPCANSALSNTRFFDLKPPLSEPVLQALTEGGFDFCTPVQAATIPLLCSFKDVA
VDAATGSGKTLAFVVPLVEILRRASTNPKPHQVMGMIISPTRELSSQIYNVAKPFISTLP
NFKCVLLVGGGQVKADVKLIQEEGANLLIGTPGRLYDIMERMDSLDLRNFEILILDEADR
LLDMGFQKQLTDIISRVPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAESKSNKDS
ALSQQSASSKTPSGLAIEYMECEADKKPSQLVDILVKNKSHKTIVYFMTCACVDYWGVVL
PCLALLKDFNLIALHGKMKQTARDKALASFTALSSGILLCTDVAARGLDIPGVDCIVQYD
TPQDPNVFVHRVGRTARMGRQGSAIVFLLPKEEAYVEFLRIRRVPLQERICPDDVADVVP
QIRSAAKKDRDIMEKGMRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPAMPE
VKHNTLSTEGFTPVADINLEEIKYKDKSREKQRRKNLLAKKEAKKQEPKPEKTKKNPSAK
ANEMKKKTAKQRRAAQTVEDADELTREYRLLKKLKKGTIDETEFAKLTGTEDLL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcctccccgtacccctgcgccaacagcgcgttaagcaacacgcgcttcttc
gacctgaagcctccactctccgaacctgtcctccaagccctaaccgaagggggcttcgac
ttctgcactccggttcaagccgccacaatccccttgctatgcagcttcaaggacgtcgcc
gtcgacgccgccaccggctccggcaaaaccctcgccttcgtcgtcccactcgtagagatc
ctccgccgcgcttccaccaaccccaaacctcaccaggttatggggatgattatatctccg
acgagagagctgtcgtcgcaaatttacaacgtggcgaagcccttcatttcgacattgccg
aatttcaagtgtgtgcttttggttgggggagggcaagtgaaagcagacgtgaagctaata
caggaggagggagccaatttgctgattggcacaccaggtagattgtatgacattatggaa
cgcatggatagcttggatttgcgcaactttgagattttgatcttagatgaggcggatagg
ctgttggatatgggattccaaaagcagctgactgatattatatctcgcgtgccaaagctt
cgaagaactggtcttttttcagctacacagactgaggcagttgaagagctggccagggcg
gggttgaggaatcctgtgagggttgaagtacgggcggaatcaaaatcaaataaggattca
gcgttgtcacagcaatctgcgtcatccaaaacaccttctggccttgccattgagtatatg
gagtgtgaggcagacaagaagccgtcgcagcttgtggatatccttgttaagaataagtct
cacaagaccatagtgtacttcatgacttgtgcttgtgttgactactggggagttgttctt
ccatgccttgctctgttgaaggatttcaatctgattgctctccatgggaagatgaaacag
accgcaagggacaaagctctagcctcatttacagctctctcaagtggtatccttctatgc
actgatgttgcagctcgtggacttgacattccgggtgttgactgtatagtgcagtatgat
acacctcaagatccaaatgttttcgtgcatagagttggcagaacagcacgtatgggtaga
caaggaagtgcaattgttttcctgttaccaaaggaggaagcttatgtggaattcctgcgg
ataagaagagttcctcttcaagaaaggatatgtccagatgatgtcgctgatgttgttcct
cagatacgatctgctgcaaaaaaagaccgtgatatcatggaaaagggcatgagggctttt
gtttcttacatccgtgcatataaagaacaccactgctcctacattttcaggtggaaagaa
cttgaaattgggaagttgggcatgggatttggactactacagctccctgcaatgcctgag
gtaaagcacaacacactttccacggagggtttcacccctgttgcagacatcaacttggag
gagatcaaatataaggacaaatctcgtgagaagcaaagaaggaagaatctgctagcaaag
aaggaggcaaaaaagcaagaacctaaacctgaaaaaacaaaaaaaaacccaagtgctaaa
gctaatgagatgaagaagaaaacagctaaacaaagacgtgctgcgcagacggttgaagat
gcagatgagttgactagagaatatcgcctgctgaaaaagctgaaaaaggggactatcgat
gaaactgagtttgccaagttgacaggaactgaggacttactatga
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