Rosa chinensis (China rose): 112187917
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Entry
112187917 CDS
T06020
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112187917
03036 Chromosome and associated proteins [BR:
rcn03036
]
112187917
Transcription factors [BR:
rcn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
112187917
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
112187917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
112187917
NCBI-ProteinID:
XP_024182650
LinkDB
All DBs
Position
2:83361104..83366961
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AA seq
647 aa
AA seq
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MSDVHLFNNISLGGRGGTNPGQLKIHPGGIMWKKQGGGKAIEVDKAVIVGVTWMKVPKTN
QLGVRIKDGLYYKFIGFRDQDVTTLTNYFQTTFGIVAEEKKLSVSGRNWGEVDLSDNMLS
FLVDSKQGFEVSLADVSQTQLQGKNDVTLEFHVDDTTGANEKDSLMEVTFHIPNSNTQFM
GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFESIAVLTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETEYVVESELAIS
DDLLNGKYKDKLEPTYKGLIHDVFTKILHGLSGAKITKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLITHDVIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHTLFDFISLKGIKIMNLGDAQVTDGVSPLLEEADDDAVVDPHLVRVKNEAGEEDSD
EEDEDFVIEKDDGGSPTDDSGGEDSDASESGGEKEKPAKKEPRKEPSTSKVPSSKKKSKE
VDEDGPKKKKQKKKKDPNAPKRAMSGFMFFSQMERENVKKDNPGIAFTDVGRVLGDKWKK
MSAEEKEPYEAKARQDKLRYKDEISGYNKSNTPQPMNVDSGNESDSE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgtccatctcttcaataacatctctctcggcggccgcggcggcactaatccg
gggcagctaaaaatacatccaggagggattatgtggaagaaacaagggggtgggaaagca
attgaggttgataaggcggtcattgttggagtgacatggatgaaggtcccaaagacaaat
caacttggtgttcggattaaagatgggttgtactataaattcattggatttcgagaccag
gatgtcactactttaaccaattatttccaaactactttcggaatagtagcagaggagaag
aagctttctgtcagtgggcgtaactggggagaagttgatttaagcgataatatgctgtct
ttcttggttgactccaagcaaggatttgaggtatctttggctgatgtctcacaaacacag
cttcaggggaaaaacgacgtcaccttagagttccatgtggatgacaccactggagcaaac
gagaaagattctttgatggaagtaacttttcacattcccaactccaacactcaatttatg
ggtgatgagaatcgtcctcctgctcaggtatttcgtgacaaaattatgtcgatggcagat
gttggtgctggaggtgaagatgctgttgtcacatttgagagtattgcagtcctcacacca
aggggtcgctacaatgttgaacttcatctttcattcttgcggttgcaagggcaggctaat
gatttcaaaattcagtacagcagtgttgttcgcctctttctccttcctaagtctaaccag
ccacatacctttgttgttgttactcttgatccgcctatccgtaaaggacaaacactgtat
ccacacattgttttgcagtttgaaactgaatatgtagttgaaagtgaactggcaataagt
gatgaccttttaaacggcaagtacaaagacaagttagaaccaacttataagggactaatt
catgatgtgttcaccaaaatactgcatggattgtctggtgccaaaattactaaaccaggg
aagttccgcagctgtcaagatggttatgctgtgaagtcttcactgaaagctgaagacgga
gttctatatcctctggaaaagagcttctttttcctacctaaacctcctacccttattact
catgatgtgattgactatgtggaatttgagaggcatggtgctggaggctcaaatatgcat
tattttgatcttcttatcagacttaaaagtgagcaagaacatctgtttagaaacattcag
aggaatgaatatcatactctttttgacttcatcagtttaaagggtatcaaaatcatgaac
ttaggagatgctcaagtaacagatggtgtgtctcctcttcttgaagaggcagatgatgat
gctgttgttgacccacatcttgttcgcgtaaagaatgaagctggtgaggaagatagtgat
gaagaggatgaagattttgttattgagaaggatgatggaggttctccaactgatgattct
gggggtgaagattctgatgctagtgaaagtggaggcgagaaagagaagcctgctaaaaag
gagcccaggaaagaaccttcaacttcaaaggtgccatcttccaagaaaaaatccaaagag
gtcgatgaagatggtccaaagaagaaaaaacagaaaaagaagaaggatccaaatgcacca
aaaagagcgatgtctggtttcatgttcttctcacagatggagagagagaatgtgaagaaa
gacaaccccgggattgcatttacggatgtgggaagagtgcttggggacaagtggaagaag
atgtcagcggaggagaaagaaccatatgaagcaaaggcccgtcaagataaattacgctac
aaggatgaaattagtggctacaacaagagtaacaccccccaacccatgaatgtggattca
gggaatgaatctgacagcgaatag
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