Rosa chinensis (China rose): 112187918
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Entry
112187918 CDS
T06020
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112187918
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112187918
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112187918
NCBI-ProteinID:
XP_024182652
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Position
2:complement(83367750..83369522)
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AA seq
434 aa
AA seq
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MCSFCVILPCLKAGADSDNSTIAVFDPVLKEREHQAEVAALQAYQPNPEAVADDLLQDVE
TILEGTNTTRRHLGHKYKGPCTATNPIDRCWRCNSEWSKNRKQLAGCVKGFGHRTRGGKR
GPIYVITDSSDDDMANPKPGTLRHAVIQTGPLWIIFKHSMTIKLNKELLVTSHKTIDGRG
ANVHIAHGAGITLQFVQNVIIHGLHIHDIVSVGGGLIRDSLDHIGLRTQSDGDGISVFGS
SHIWLDHLSMWNCYDGLIDVIQGSTAITISNCHFTHHNDVMLFGASDIFEGDKIMQITVA
FNHFGKGLIQRMPRCRHGFFHVVNNDYTHWLMYAIGGSSHPTIISQGNRYVAPPNPAAKE
ITNRNYATEDVWMTWQWRSEGDLMENGAYFRESGVPRTGGEFSRHDMMKAKPGTFVRRLT
RFAGTLGCKVGKEC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcattctgcgtaatacttccatgcctaaaagcgggcgcagattccgacaatagc
acaattgcggtgttcgatcctgtccttaaggagcgggagcatcaggccgaggtagctgcc
ctccaggcctatcaacccaaccccgaagcagttgcagatgacctacttcaagatgttgaa
acgattttggaagggaccaacaccacaaggaggcatcttgggcataagtacaaaggccca
tgcacggccacaaaccctattgaccggtgctggaggtgcaatagcgaatggtccaagaac
cggaagcagctcgccggttgcgtgaaagggttcgggcacaggacccgcggaggaaagcgc
ggtcccatctacgtcatcaccgattcctccgacgacgacatggcaaaccccaagccagga
actctccgccacgccgtgatccaaactggcccactttggatcatcttcaaacacagcatg
accatcaagttgaataaggagctacttgtgaccagccacaagaccatcgacggccgtggc
gccaacgttcacatcgcccacggtgccggaatcaccctgcagtttgtccagaatgtgata
atccacggccttcacatccacgacattgtgtcggtcggaggtggcctgatcagagactca
ttggaccacattggacttaggacccaaagtgatggagatggtatctccgtctttggatcc
tctcacatctggctcgaccatctctccatgtggaactgctacgatgggctcatcgacgtc
atccagggatccaccgccattaccatctccaactgccacttcactcaccataacgacgtg
atgcttttcggagcaagcgatatatttgaaggcgacaagatcatgcaaatcacggtggcg
ttcaaccacttcgggaagggcttgatccagagaatgccaaggtgcagacacggcttcttc
cacgttgtgaacaacgactacacccactggctcatgtacgccattggaggcagctcacac
ccaaccatcatcagccagggcaaccgctacgtcgccccaccaaaccctgcagcaaaggag
atcacaaacaggaactacgcaaccgaggatgtgtggatgacatggcaatggagatcggaa
ggtgatctaatggagaacggagcctacttccgcgaatctggagtgccgagaacgggcgga
gagttcagccgccatgacatgatgaaggcaaagccaggcacatttgtgaggaggctcaca
cgctttgcgggtactcttggatgcaaggttggtaaggaatgttaa
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