Rosa chinensis (China rose): 112187941
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Entry
112187941 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle protein 27 homolog B
KO
K03350
anaphase-promoting complex subunit 3
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112187941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112187941
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112187941
03036 Chromosome and associated proteins [BR:
rcn03036
]
112187941
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
112187941
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
112187941
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
112187941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
ANAPC3
TPR_12
TPR_19
TPR_11
TPR_17
TPR_16
TPR_7
TPR_14
TPR_CcmH_CycH
TPR-S
TPR_9
TPR_10
TPR_15
TPR_4
T7SS_EccA1_N
DUF7017
ANAPC8
ARM_TT21
ARM_TT21_C
Coatomer_E
SRP_TPR_like
TPR_21
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
112187941
NCBI-ProteinID:
XP_024182684
LinkDB
All DBs
Position
2:complement(5286177..5293897)
Genome browser
AA seq
753 aa
AA seq
DB search
MEAILRDSVHHSLRDFLHRNAIFLCERLCAEFPSETNLQLLAGCYLHSNQAYAAYHILKG
TQVAQSRYLFAMSCYQMNLLNEAEAALCPPNEPSAEVPNGAAGHYLLGLIYRYTDRRKSA
IHHFKQALTIDPSMWAAYEELCVLGSAEEAAVVFGEAAALSIQKQYLHHGLASQSLLTVN
DDCNLVSGRNFSFEDVSPRQLKLMQGSNTRDSSGNSHVILGGVSGQPTNGSSNISFYNTP
SPMPMQLSGIAPPPVCRNVLPNGLNLSSGTDSSPRSTMSSTIQGGRRKFVDEGKLRKISS
RLSFDSGNRRSNRLAAEAGANTNASASMAAGNGTTNTSKIGSSKLGSVARSLTSRKGQPW
ANENLDEGIRNETFDDSRSNTAAISGFTPTSDTRYLEQDGATLSIGGGIMHASKVISGAS
EILSLLRTLGEGYRLSCMYRCQDALDVYLKLPYKHYNTGWVLCQVGKAYFELLDYFEADR
AFSLARQASPYSLEGMDVYSTVLYLLNEDMKLSYLAQELISTDRLAPQSWCAMGNCYSLQ
KDHETALKNFQRAVQLNXKFTYAHTLCGHEYVALDDFENGIKSYQSALRLDARHYNSWFG
LGMIYFRQEKFEFAEHHFRTANQINPCSSVIASNLGTALHALQRSDEALAIMEKAIRADE
KNPVPMYQKANILMSLEKFDEALAVLEQLNEYSPRESSVHALMGRIYKRRNMHDKAMLHF
GIALDLKPSTTDVTAIKAAIERLLVPDEIEDNL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatactccgagactccgttcaccacagccttcgcgatttcctccaccgcaac
gccattttcctctgcgagcgtctctgcgccgagttcccctccgagacaaatttgcaattg
ttagctggatgttacttgcatagtaatcaagcttatgccgcataccatattttaaaggga
acacaagtggctcaatcacgctacttgtttgctatgtcatgctatcagatgaatcttctg
aatgaggcagaagcagcattatgcccccctaatgagcctagtgcagaggttccaaatggc
gcagcaggtcattaccttcttgggcttatttataggtatactgatagaaggaaaagtgcc
atccatcactttaaacaggctttgactatagacccttcaatgtgggctgcatatgaggag
ctgtgcgtgctaggttctgctgaagaagcagctgtggtttttggggaagctgctgctctc
tccatacaaaaacagtacctacatcatggattagcttctcaaagtttactcaccgtcaat
gatgattgcaatttagtttctggaaggaactttagctttgaagatgttagtccaagacaa
ttgaaactaatgcaaggcagtaatacgagagatagttctggaaattctcatgttatttta
ggaggagtttctggtcagcctacaaacggcagttctaacatatctttctataacactcct
tcaccaatgcctatgcagttgtcaggtatcgctccaccgccggtttgtagaaatgtcctg
ccaaatggcctaaacctcagctctggtactgatagctctcctaggtcaactatgagctct
accattcaaggtgggagaagaaagtttgttgatgaaggaaaacttcgaaagatttctagt
agattatcttttgattctggcaaccgaaggagcaatagacttgctgctgaagcaggggct
aacaccaatgcaagtgcgtccatggcagctggaaatggaactaccaatacatctaaaatt
ggaagttctaagttgggctctgtagcacgctccttgacaagtcggaagggtcagccatgg
gccaatgaaaaccttgatgaaggcatacggaatgagacattcgatgattcccgttcaaat
acagcagctatctctggttttactcccactagtgataccagatatcttgaacaagatgga
gcaacattgtcaattggtgggggtattatgcatgcttcaaaagttattagtggtgcttca
gaaatattgagccttttgagaactcttggggaaggttataggctttcatgcatgtacagg
tgccaggatgcactggatgtctatctgaaacttccatacaagcattacaatacaggctgg
gtactctgccaggttggaaaagcttattttgaattgctagattattttgaagctgatagg
gccttcagtctggctcgacaggcatcaccttacagtttagaaggaatggatgtatattct
acagttctttatcttttgaacgaagatatgaagttaagttacctggcacaagagctcata
tcaactgatcgcttagctcctcagtcttggtgtgcaatgggaaattgctatagcttgcag
aaagatcatgaaactgctctgaagaatttccagcgagctgttcaacttaatntcaaattc
acatatgcgcataccctttgtggtcatgaatatgtagccctggatgattttgagaatgga
ataaagagctatcagagtgcacttcggcttgatgcaaggcattataactcctggtttggg
cttggaatgatttattttcggcaagagaagtttgagtttgcagagcatcacttccggaca
gctaaccaaataaatccatgttcttctgttattgcgtctaatcttggcacagcattgcat
gctttacagagaagtgatgaagctttggcgataatggagaaggctattagagcagatgag
aagaatcctgttcccatgtatcaaaaggctaatatattaatgagcttagaaaagtttgat
gaagctttagcagtcttggagcagcttaatgaatattctcctcgtgaaagtagtgtgcat
gctttgatgggtaggatttataagcggcgaaacatgcatgacaaagcaatgcttcatttt
ggcattgcattggatttgaaaccatctacaactgatgtcactgccattaaggctgccatt
gagaggttacttgtaccggatgaaatagaagacaacctgtag
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