KEGG   Rosa chinensis (China rose): 112188009
Entry
112188009         CDS       T06020                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112188009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112188009
Spliceosome [BR:rcn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112188009
 Complex B
    112188009
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded Pax2_C
Other DBs
NCBI-GeneID: 112188009
NCBI-ProteinID: XP_024182772
LinkDB
Position
2:complement(13429542..13434836)
AA seq 592 aa
MADYEGRYDGNGEDADGSSPQPRSTNHGGLDDYSDSKSQHSRDYERESSKSREKGRDKER
DRDRDRERDRDRDRDRDRGRSKDKDRERDRDRGRDRERERDRDRDHDRHHRDRHRDRERS
ERRRDKDDDDDEDHYRSRDRDRRRDYDRDREDRHRRRSRSRGRSEHKSRSRSRSRSRSKS
KRISGFDMAPPASALLPGAAVPVTGQIPGATPTIPGMFPNMFPLATGQQFGALPVMPVQA
MTQQVGIIATRHARRVYVGGLPPTANEQSVATFFSHVMHAIGGNTAGPGDAVVNVYINHE
KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLANV
GLTPGSAGGLEGPDRIFVGGLPYYFTEVQIKELLESFGPLRGFDLVKDRETGNSKGYAFC
VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRFLLL
QQPASVATKVVCLTQVVTEDELKDDLEYEDIVEDMKQEGEKFGSLVSVIIPRPRPDGQPS
PGVGKVFLEYADVDGSTKARTGMNGRKFGGNPVVAVFYPEDKFAQGDYDASC
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggccgactacgaaggaaggtacgacggtaacggagaggacgctgacggctcctctccc
caaccgcggagcactaaccatggcggtctcgacgattacagcgattccaaatctcagcat
tcccgtgattatgagagagaatcttcaaagagtagagaaaaggggcgcgataaggagagg
gacagggacagagatcgggagagagacagggatagggacagggacagggacagagggaga
agcaaggataaagatagagagagggacagagacaggggtagggatagggaacgagaaagg
gacagagacagggatcatgatcgtcatcatagagaccgccacagggatcgtgaaaggagt
gagcgaaggagagataaggatgatgatgatgatgaggatcactaccgtagccgcgaccgt
gataggcggagggattatgacagagacagggaggataggcataggcgcaggtctcgttcc
aggggtaggtctgagcataaatccagatcaaggtcgcgttcacgctcacgttccaaaagc
aaaagaattagcggttttgacatggcacctcctgcttctgcactattacctggtgctgct
gttcctgtgacaggccagattcctggagctactccaaccattcctgggatgttcccaaac
atgttccctttggcgactggccagcagtttggagcacttccagttatgcctgtgcaggca
atgactcaacaggttggcattattgctactaggcatgcccggagggtgtatgttggaggg
cttccccctacagcaaatgaacagtcggttgctacatttttcagccatgtaatgcatgct
attggagggaacactgctggcccaggagatgctgttgttaatgtttacatcaaccatgaa
aaaaaatttgcctttgtggagatgagatctgtggaagaggccagcaatgcaatggctttg
gatgggattattttcgagggtgcccctgttaaggttaggagacctagtgactacaaccca
tctcttgctgcaacacttggtccaagccagcccagtccaaatctgaacttggctaatgtc
ggcctgacaccaggttctgctggtggccttgagggacctgatcgcatttttgttggtggt
ctaccctattactttacagaagtacagatcaaggagttgctcgagtcttttggacccctc
cgtggttttgatctagtgaaagatagggaaacaggaaactcgaaaggatatgccttttgt
gtttaccaagatctttcagttaccgacatagcctgtgcagcactgaatgggattaaaatg
ggagacaagacccttacggtcaggcgtgctaatcaaggtgccaaccagccaaaacctgag
caagagagtgttttgttgcatgcacagcagcaaattgcattgcagaggttcctgttgttg
caacagcctgcttcggtggccaccaaagttgtatgcttaacacaagtagttacagaggat
gagctgaaggatgatcttgagtatgaagacatagtggaagatatgaagcaagagggcgag
aaatttggttcacttgtgagcgtcatcattccacgtccacgaccagatggtcaaccctca
cctggagttggaaaggtgtttttggagtatgcggatgttgatggttccacaaaagcccgt
acagggatgaatggcaggaaatttggtgggaatccagttgtggcagtgttttatccggag
gacaagtttgcccagggtgactatgacgctagttgctag

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