Rosa chinensis (China rose): 112188061
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Entry
112188061 CDS
T06020
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112188061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112188061
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
112188061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
112188061
NCBI-ProteinID:
XP_024182850
LinkDB
All DBs
Position
2:11305880..11314496
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AA seq
793 aa
AA seq
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MISDGVEDEEKYLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKEEARRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMSRGIQNPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVRDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDLYKETVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDILLGACPQLQPSVDIKTVLSQLME
RLSNYAASSIEVLPEFLQVEAFSKLSNAIGKVIEAHVDMPVIGVVTLYSSLLKFTLHVHP
DRLDYADQVLGSFVKKLSGKGKIEDSRATKQVVALLSAPLEKYNDIVTALKLTNYPRVME
FLDTGTNKVMATVIIQSIMKNTTHILTAEKVEALFELIKGLIEDLDGTLHDEVDEDDFKE
EQNSVARLIQMFHNEDPEEMFKIIGTVRKHIMSGGPKRLPFTVPPLVFNSLKLVRQLQGG
HEDKENPFGEEASTTPKKIFQLLSQTIEALLNVPAPELALRLYLQCAEAANDCDLEPVAY
EFFTQAYILYEEEISDSKAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKP
DQCRAVYACSHLFWVDDQENMKDGERVLICLKRALRIANAAQQMANATRGSTGSATLFVE
ILNKYLYFFEKGNPQITVASVQSLIELITTEMQSDSTPAESATNAFFASTMRYIQFQKQK
GGAVGEKYEQIKV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgacggagttgaagacgaagagaagtacctggccgccggaatcgccggcctc
caacagaatgccttctacatgcatcgcgctctggactccaacaatctcagggacgctctc
aagtactcggctcagatgctgtcggagctccgcacctccaagctttcgcctcacaaatac
tacgagctttatatgcgtgcgtttgatgaattgaggaaattggagatgttcttcaaggag
gaggctcggcgcggttgctctattattgatctgtatgagcttgtgcagcatgctggcaac
atattgcccagattatatcttctgtgtacagtaggatctgtttacatcaaatctaaggaa
gctcctgctaaggatgtcctgaaagatcttgtggaaatgtcacgtggcattcagaatcct
gtacgtgggctctttttaaggagttacctttctcaagtcagtagggataagttgcctgat
attgggtcggagtatgaaggggatgcggatactgtcagggatgctgttgagtttgttctc
caaaacttcactgagatgaacaagctttgggtgcggatgcaacatcaggggcctgctagg
gaaaaggagaaacgggagaaagaaaggagcgagctacgtgatcttgttggtaaaaacctg
catgttctcagtcagatagaaggtgttgatctggatttgtacaaagagaccgtgcttccc
agagtcctggagcaggttgtcaattgtaaagatgagctggcacagttttatttgatggat
tgcattattcaagtctttcctgatgagtaccacttgcaaactcttgatatattgttgggt
gcttgcccccaacttcagccatctgttgatatcaagacagtgctatcccagttaatggaa
aggctttccaactatgctgcctcaagcatagaagtgttgcccgagttcttacaagtagaa
gctttttctaaactgagcaatgcgattggaaaggtgattgaagcgcacgttgacatgcct
gtaattggtgttgttactttgtactcatcccttcttaaatttactctccatgtgcatccg
gatcgacttgattatgctgatcaagtgttggggtcatttgttaagaagctctccggaaaa
ggaaaaattgaagacagcagggcaacaaaacaagttgttgcacttttaagtgctccattg
gagaaatataatgatattgtgactgctttgaagcttacaaattatccccgtgtcatggaa
ttccttgatactggaacaaataaagtcatggcaactgttataatacaaagcattatgaaa
aatacaactcatatattaactgctgagaaggtcgaggcattgtttgaattaataaaagga
cttatcgaggatttggatgggactcttcatgatgaggttgatgaagatgatttcaaggag
gagcagaattctgttgcgagacttattcaaatgttccacaatgaagatccagaagagatg
tttaagatcataggtactgtgcggaagcacatcatgtctggaggaccaaagcgcctaccc
tttactgtccctcccctagtctttaattctctaaagttggtcagacaattgcaaggagga
catgaagataaagaaaatccttttggagaagaagcgtcaactacaccaaagaaaattttt
cagctcttgtctcagactattgaggctctgttgaatgtgccagctcctgagctagcttta
cggctgtacttgcaatgtgctgaggctgcaaatgactgtgatttagaacctgttgcgtac
gaattcttcacccaagcatatattctctatgaagaagaaatttcagattcgaaagcacag
gtgactgcaattcatttgataattgggactctccagaggatgcatgtatttggtgttgag
aacagagatactttaactcacaaagccacagggtattcggcaaagcttttaaagaagcct
gatcagtgccgagctgtctatgcttgctcgcatcttttctgggttgatgatcaggagaac
atgaaggatggggaaagggtactgatttgcctaaagagagctttaaggattgcaaacgct
gcccagcagatggccaacgcaacccgtggtagcactggttcagcgacactcttcgttgaa
atactgaacaagtacctttatttctttgagaagggcaacccacagataactgttgcttct
gtacaaagcctgattgaattgattactactgaaatgcaaagtgactcaaccccagcagag
tcggctacaaatgcattctttgccagcacgatgcggtacattcaattccagaagcagaaa
ggtggcgcagttggtgaaaaatatgagcaaatcaaggtgtga
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