Rosa chinensis (China rose): 112188081 Help Entry 112188081         CDS       T06020                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism rcn  Rosa chinensis (China rose) Pathway rcn04148   Efferocytosis Brite KEGG Orthology (KO) [BR:rcn00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     112188081  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rcn04131]     112188081 Membrane trafficking [BR:rcn04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     112188081    Hops complex     112188081 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 VPS18_RING_C Clathrin zf-RING_Vps41 zf_RING_Vps8 zf-RING_11 zf-rbx1 zf_RING_Vps8_fungal zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 Nup54_57_C zf-ANAPC11 zf-RING_5 Motif Other DBs NCBI-GeneID:  112188081 NCBI-ProteinID:  XP_024182873 LinkDB All DBs Position 2:complement(77659269..77668873) Genome browser AA seq 987 aa AA seqDB search MDSGRQVFTVDLLERYAAKGRGVITCMAAGNDVIVLGTSKGWIIRHDFGVGDSFDIDLSA GRPGEHSIHRVFVDPGGSHCIANIAGTGGADTFYIHAKWSKPRPLAKLKGLVVNAVAWNR QQITEVSTKEVILGTDNGQLYEIAVDEKDKKEKYVKFLYELTELPEAFMSLQMETATILN GTRYYVMAVTPTRLYSYTGIGLLDAIFASYLEHPVRFMELPGEIPNSELHFYIKQRRAVH FAWLSGAGIYNGGLNFGSQHSSSTGDENFVENKALLAYSKLSENTEVAVPSSMAVSEFHF LLLIGNKVKVVNRISEQIIEELQFDQTSESASRGIIGLCSDATAGLFYAYDQNSVFQVSV NDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVQAEAAFTSKDYLRAASFYAKINYI LSFEEITLKFITVNEQDALRTFLLRKLDCLAKDDKCQITMISTWATELYLDKINRLLLED DTALENRNSEYQSIIKEFRAFLSDSKDVLDEATTMRLLESYGRVEELVFFASLKEQYEIV VHHYIQQGEAKKALEVLQKPSVAIDLQYKFAPDLIMLDAYEAVESWMATNNLNPRKLIPA MMRYSSEPHAKNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQFKF GKGRESGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMVAKHVIEQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNNQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEECGVCR RKILTVGREYQMTRGYSSVGQMAPFYVFPCGHAFHAQCLIAHVTRSTNEAQAEYILDLQK QLTLLDGEARKDSNGPLTDETITSMAPVDKLRSQLDDAVASECPFCGDLMIREISLPFIL PEEQYQSTSWDIQSRNLGNQRSLSLTL NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggattcggggcggcaggttttcacggtggaccttctagaaaggtacgccgcgaaggga cgcggagtcatcacgtgtatggcggccggaaacgacgtcattgtgctcggaactagtaaa ggatggataatccggcacgattttggggtcggcgattcgttcgatattgatctctctgcg ggtcgtcccggggagcattcaattcatagagtttttgttgatcctggagggagccactgt atcgccaacattgctggtaccgggggtgccgatactttctatattcatgcgaaatggagc aagccgcgtcctttggccaagttgaaaggtcttgtggtgaatgctgttgcctggaataga cagcagataacagaagtttcaacaaaggaagttattctcggtacagacaatggccaactt tatgagattgctgtggatgagaaggataagaaggagaagtatgtgaagtttctgtatgaa ctaactgaacttccagaggctttcatgagtttgcagatggaaactgcgacaattctgaat ggaactagatactatgtgatggctgttactcctacacgactctattcctatacgggaatt ggattgttggatgctatttttgctagttacttggagcatccggtgcgtttcatggaactt cctggtgaaatacctaacagtgaattgcatttctatatcaagcaaagacgagcagtacat tttgcatggctttctggagctggaatctataatggcggtttaaattttggttctcagcat agttcttcaactggagatgaaaattttgtggagaacaaagctcttctggcatattcaaaa ttgtctgagaatactgaagttgcggtgcccagttctatggccgtttcggaatttcatttc ttgcttcttatcgggaataaggttaaggttgtgaatagaataagtgagcaaattattgag gaacttcagtttgatcaaacatctgaatcagcttcaaggggtatcattggattatgtagt gatgccacagctggactgttctatgcttatgaccagaactctgtatttcaggtttctgtt aatgatgaaggccgagatatgtggaaagtttatctggacatgaaagagtatgctgctgct ttggcaaattgtcgtgacccacttcagagggaccaagtatatttagtacaggctgaggct gcatttacctcaaaagattatctcagagcagcatctttctatgcaaagataaactacata ttatcattcgaggagatcactctgaagtttatcactgtcaacgaacaggacgctttgaga acctttttgttacggaaacttgactgtcttgcgaaggatgacaagtgccaaataaccatg atttcaacgtgggcaactgaattgtacttggataagataaatcgcctactattagaagat gacactgcattggaaaatcggaattcagagtatcaatcaattattaaagagtttcgtgca tttctgagtgactccaaggatgtattggatgaagcaaccacgatgagactattagaaagt tatggtcgagttgaagagttggtattttttgctagtctgaaggaacaatatgaaattgta gtgcaccattatattcagcaaggagaggcgaagaaagcattggaggttcttcaaaaacct tctgttgctattgatcttcagtataagtttgctcctgacctaatcatgcttgatgcatac gaagctgtggagtcatggatggccacaaacaacctcaaccctaggaaactcattcctgca atgatgcgctattcgagtgaaccacatgcaaaaaatgaaacacatgaagtcattaaatac ttggagtattgtgttcaccgtttgcacaatgaggaccctggagttcacaacttgctttta tcactatatgccaagcaggaagatgatagtgcacttttgcgtttcctacaatttaagttt ggaaaaggacgggaaagtggccctgaattcttctacgatcccaagtatgctttacgcctt tgccttaaagaaaagcgaatgcgtgcctgcgttcatatatacagtatgatgtccatgcat gaagaagcagttgctctcgccctacaggttgatcctgagcttgctatggctgaagctgac aaggttgaagacgatgaggacttgagaaagaagctctggctcatggttgcgaagcatgta atagaacaggagaagggagctaagagggagaacatacggaaggcaatagcgtttcttaaa gaaacagatggccttttaaagatagaggatatattaccattctttccggactttgccctg attgatgactttaaggaggcaatttgctcatcattagaggattacaataatcaaatcgaa caactgaagcaagagatgaatgatgcgacacatggtgccgacaacatcagaaatgacatt agtgcccttgctcaaagatatgctgtgattgatcgtgatgaagaatgtggggtgtgtcgg cgtaaaattttaactgttggtagggagtatcagatgactaggggctattcatcagtaggg caaatggcccccttttatgtctttccttgtggacatgccttccatgcacaatgcctgatt gcccatgttacacgtagcacaaatgaagctcaagcagagtatattctggatctgcagaag caactcactctattggacggagaagctaggaaggattcaaatgggcccctgactgacgag accataacaagcatggcccctgtagacaagctccgatcacagttggatgatgctgtggcc agcgaatgcccattttgtggggacttaatgatccgcgagatctctctgcctttcattctt cctgaggaacagtatcagagtacttcatgggatatacagtcgcgtaatcttggaaaccag aggagtctttctttgactttgtga

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