Rosa chinensis (China rose): 112188169
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Entry
112188169 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: probable glucan 1,3-alpha-glucosidase
KO
K05546
mannosyl-oligosaccharide alpha-1,3-glucosidase [EC:
3.2.1.207
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00510
N-Glycan biosynthesis
rcn01100
Metabolic pathways
rcn04141
Protein processing in endoplasmic reticulum
Module
rcn_M00073
N-glycan precursor trimming
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
112188169
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112188169
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.207 mannosyl-oligosaccharide alpha-1,3-glucosidase
112188169
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Gal_mutarotas_2
Glyco_hydro_31_3rd
DUF5110
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
112188169
NCBI-ProteinID:
XP_024182996
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All DBs
Position
2:complement(35763083..35769582)
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AA seq
924 aa
AA seq
DB search
MKKTQTMNNLTLLLLLLLLTCHLSPVLSWKKDEFRNCNQTPFCKRARARNPGSSSLTAQD
AAISDGELTAKLVPKRIEQEETTPDQIKPLLLTLSAYQDGILRLRIDELDPPRKRFEVPD
VVLPEFESKKLWLQRLSTETIDGDAAPSSVVFLSDGYDAVLRHDPFEVYVREKRGNRVIS
VNSNGLFDFEQLKEKKGEGEDWEERFRGHTDKRPYGPQSISFDVSFYGADHVYGIPERAS
SLALKPTRGPGVEESEPYRLFNLDVFEYIHDSPFGLYGSIPFMISHGKARGTSGFFWLNA
AEMQIDVLGSGWDAEAGIALPSSQSRIDTFWMSEAGIVDAFFFVGPGPKDVARQYASVTG
TPAMPQLFAVAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKRYFTWDRM
LFPHPEEMQRKLAAKGRHMVTIVDPHIKRDDSYFLHREATEKGYYVKDANGNDYDGWCWS
GSSSYLDMLRPEVRSWWATKFSTENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDAVHLG
DVEHRELHNAYGYYFHMATADGLVQRGDGRDRPFVLSRAVFAGSQRHGAVWTGDNTAEWD
HLRVSVPMILTLGLTGISFSGADVGGYFGNPEPELWVRWYQLGAYYPFFRGHAHHDTKRR
EPWLFGEKNTERIREAIHIRYMLLPYFYTLFREANTSGFPVARPLWMEFPSEEATFTNDE
ALMIGNSLLVQGIYTEHAKHASVYLPGKESWYDVKTGAAYKGGKTHKLDVNEEGVPAFQR
AGTIIPRKDRFRRSSTQMVNDPYTLVIALNSSQAAAGELYVDDGKSFEFQQGSYIHRRFV
FADGKLTSLNLAPAQTQFSSECVIERIILQGLSTRQKSALIEPANQKAEIEQGPLLLYSR
QGPSVLTVRKPNVRIADDWVIKIF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacccagacgatgaacaacctcactcttctccttctcctcctcctcctcacc
tgtcacctctccccagttctctcatggaaaaaagacgagttccgaaactgtaaccaaacc
ccattctgcaaacgtgctcgagcccgcaaccctggctcgtcctccctcacagcccaagac
gccgccatctccgacggcgagctcaccgccaagctcgtccctaagagaatcgaacaagaa
gaaacaacccccgatcaaatcaagcccttgcttctcactctctctgcttaccaagacggg
atcttgcgcctcaggatcgacgagctcgatccgccccgcaagcgcttcgaggtccccgac
gtcgttttgccggagttcgagagcaagaagctctggctgcagaggctttcgaccgagacg
atcgacggcgacgcggctccgtcgtcggtcgtgttcttatccgacggctacgacgcggtg
ctgcggcacgatccgttcgaggtttacgtccgcgagaagaggggtaatcgtgtaatttcc
gtgaattccaatggcctatttgattttgagcagctgaaagagaagaagggagagggtgag
gattgggaagagaggtttagagggcacacggataagaggccctacggccctcagtccatt
agttttgatgtgtccttttatggggctgatcatgtttacgggatccctgagcgtgcttca
agcttggctttgaagcccactagaggtcccggggttgaggaatctgaaccctatagactg
tttaacttggacgtgtttgagtatattcatgattccccattcgggctttacggctctatt
ccattcatgatttcccacggtaaggcccgagggacgtccgggttcttttggttgaatgct
gctgaaatgcagattgatgttcttggaagcgggtgggatgccgaggcaggcattgctctc
ccttcgtcgcagagtaggattgacacgttttggatgagtgaggccggtattgtggatgct
ttttttttcgtgggaccgggaccaaaggatgtagcacgtcagtatgcgagtgtgactggc
acgcccgcaatgccgcagctttttgcggtggcgtatcaccaatgtaggtggaattataga
gacgaggaggatgtggagcaagttgattctaagtttgatgagcatgatattccgtatgat
gttttgtggcttgatattgagcacacagacgggaagagatattttacatgggataggatg
cttttcccgcacccggaggagatgcagaggaagttggctgctaagggtaggcacatggtt
actattgtggaccctcatattaagcgagatgactcgtactttttgcacagggaggccaca
gaaaaaggctattatgttaaggatgccaatgggaatgattacgatgggtggtgctggtct
ggttcgtcatcatatttggatatgttgaggccagaggttaggtcctggtgggctacaaag
ttctctactgaaaattatgttggttcaactccctccttgtacatctggaatgacatgaat
gagccttctgtcttcaatggtcctgaggtcacaatgcctagagatgctgtacatctagga
gatgtagaacaccgggagttacataacgcctatggttactactttcacatggctacagca
gatgggcttgttcagcgaggtgatggaagggataggccatttgttttatcgagagcagta
tttgctggaagtcaaaggcatggagcagtatggacaggagacaatacagctgaatgggat
cacctcagggtttcagttccgatgattttgactcttggtcttactgggatatcattctct
ggtgctgatgtgggtgggtattttggcaatccggaacctgagttgtgggttcgttggtat
caattaggagcctactatcctttctttagaggtcatgctcaccatgacaccaaaagacga
gaaccatggttatttggagaaaaaaatactgaacgtataagggaggctatacacatccgt
tacatgttgcttccatacttttacacattattcagagaggcaaacaccagtggatttcca
gttgctcgtccattgtggatggagtttccttccgaggaggctactttcacaaatgatgag
gctctcatgattggaaacagtcttttggtacaagggatctatacagagcatgcaaaacat
gcttctgtttatttgcctgggaaagaatcatggtatgatgtgaaaactggagcagcttac
aagggaggtaagacccataagctggatgttaatgaagagggtgttcctgctttccagagg
gctgggactatcataccaaggaaagaccgctttcgtcggagttccacccagatggtgaac
gatccatacactctggtgatagcactgaatagttcacaggcagctgcaggtgaactctat
gtggatgatggaaaaagcttcgagtttcagcaaggatcctatatccatcgtcgctttgtt
ttcgcagatgggaagcttacatctcttaatctggcacctgcacaaacccaattttcttca
gaatgtgttattgagaggattattctgcaaggcctgtctacgaggcaaaagagtgcgcta
attgaaccggcaaatcaaaaggctgagattgaacagggcccacttctcctttattcaagg
cagggaccatcagtgttaacggttcgtaagcctaatgttcggatagcagatgattgggtc
ataaaaatattttag
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