Rosa chinensis (China rose): 112188336
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Entry
112188336 CDS
T06020
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112188336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112188336
Spliceosome [BR:
rcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112188336
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
112188336
NCBI-ProteinID:
XP_024183195
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All DBs
Position
2:19587309..19591063
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AA seq
486 aa
AA seq
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MATLADSFLADLDELSDNEADVPVEDDADVANMEEDVDGDLADLETLNYDDLDSVSKLQK
SQRFADIMQKVEGALEKGSDMSNHALVLEDDPEYQLIVDCNALSVDIENELVIIHNFIRD
KYRPKFPELESLVHHPIDYARVVQKIGNEMDVTLVDLEGLLPSATIMVVSVTASTTSGKP
LPEDVLEKIVDACDRALALDSAKKKVLDFVESRMGFIAPNLSAIVGSAVAAKLMGMAGGL
AALAKMPACNVQLLGAKKKNLAGFSTATSQYRIGYVEETEIFQTTPPALRMRAGRLLAAK
STLAARVDSTRGDPSGNTGKAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKDKNYGSTGGATSGLTSSLAFTPVQGIELSNPQAHGQQLGSGTQSTYFSETGTF
SKIKRI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctagccgattcatttcttgctgatcttgatgagctatctgacaatgaagcc
gatgttcctgttgaagatgatgctgatgttgcaaacatggaggaagatgtcgatggggac
ttggcagacttagagacacttaactatgatgatctggatagtgtttcaaaattgcagaaa
tcacaaagatttgctgatataatgcagaaagtggaaggtgcacttgagaagggttccgat
atgtcaaaccatgcactagttttggaagatgatccagaatatcagctgattgtggactgt
aatgcgttgtcagttgacattgagaatgaacttgtaatcatccacaattttattcgtgac
aaataccggccaaaatttccagagctcgagtcacttgttcatcatccaattgattatgct
cgggttgttcagaaaattgggaatgaaatggatgtaacccttgttgatctggaggggctt
ttaccttcagcaactattatggttgtgtcagttacagcttcaactacaagtggaaagcca
cttccagaggacgtcctggagaaaatagttgatgcatgtgatcgagcccttgctctcgat
tcagcaaagaaaaaagttcttgattttgtagaaagtagaatgggttttattgcaccaaat
ctttctgctattgttgggagtgctgttgcggcgaaacttatggggatggctggtggtctt
gctgccttagctaaaatgcctgcttgtaatgttcagcttcttggtgctaagaaaaaaaat
cttgctgggttttccactgcaacatcacaatatcgtattggttatgttgaggagacagag
atatttcaaactacaccccctgctcttaggatgcgtgctggtcggctcttggctgcaaaa
tcaacccttgcagcgcgggtggattctaccagaggagatccatctgggaacactggaaag
gcattccgagaggagatccgtaagaaaattgaaaaatggcaggagcctccccctgcaaag
caacctaaaccacttcccgttcctgattctgaacctaaaaagaagagaggtggacgtcga
ctcaggaagatgaaagaaagatatgcgataacagacatgaggaagctcgcaaacaggatg
cagtttggcatacctgaagagagttctttaggggatggactgggtgaaggatatggaatg
cttggtcaggctgggagtggcaagctgcgtgtgtcgatgggtcagagcaaacttgctgct
aaagttgctaaaaagtttaaggataagaattatggaagcactggtggtgctacatctgga
ctgacttcaagtttggcatttactcctgtgcaggggattgagctctcaaatcctcaggcc
catggacagcagcttggcagtggaactcaaagcacctatttctctgaaacaggaacattt
tcaaaaatcaagaggatctga
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