Rosa chinensis (China rose): 112188582
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Entry
112188582 CDS
T06020
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03420
Nucleotide excision repair
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112188582
09124 Replication and repair
03420 Nucleotide excision repair
112188582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rcn03051
]
112188582
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112188582
Proteasome [BR:
rcn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112188582
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112188582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
Rad60-SLD_2
UBA_RAD5A
CUE
UBA_3
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
112188582
NCBI-ProteinID:
XP_024183494
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All DBs
Position
2:complement(78576730..78582330)
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AA seq
391 aa
AA seq
DB search
MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE
ENQVAENSFIVIMLSKASPSGSSSTQGAPKSQAQPASTPSTTTTPAAAPAPVPAPAPAPV
VAQSQPVVETAAVVAPTDSSVTDVYGQAASNLVAGNNLEVIVQQILDMGGGSWDRDTVLR
ALRAAFNNPERAVEYLYSGIPEQAEVPPAAQVPVGEQAVNPPAINPPAQAPQAAAPAGGP
NANPLDLFPQGLPSVGANAGAGNLDFLRNSPQFQALRTMVQANPQILQPMLLELGKQNPH
LMQLIQAHQADFLRLINEPVEGGGEGNLLGQLGSAAMPQAVTVTPEEREAIERLEAMGFD
RALVLEVYFACNKNEELAANYLLDHMHEFEE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtcaagactttgaaaggcaccaacttcgagatcgaagtggaaccccag
cagttggttgcggatgtcaagcaaattatagagacggcacagggtgcagatgtgtaccct
gcctcaaaacagatgcttattcaccaggggaaagttcttaaggacgccacgactctagaa
gaaaatcaagttgctgaaaacagctttattgtgataatgttgagcaaggcttcacctagt
ggaagctccagtacgcaaggtgcccccaaaagtcaggctcaacctgctagtactcctagc
acgacgacaacaccagcggcagctccggctccagttccggctcctgcacctgccccagtt
gtggcacagtcacaacctgttgttgaaactgctgctgttgtagctcccactgattcttca
gtaactgatgtgtatgggcaagctgcatcaaatcttgttgcaggaaataatttagaagtt
atcgttcaacagattctagatatgggtggaggaagttgggatagggataccgttcttcgt
gctttacgtgctgcatttaacaaccctgaaagggctgttgaatatctttattccggaatt
cccgaacaagctgaagtacctccagctgcccaagttcctgttggtgaacaggcagtaaat
cctccagcaataaatcctcccgcccaggctccacaagcagcagcgcctgctggtggtcca
aatgcaaacccgctggatctgtttccacagggccttcctagtgttggtgcaaatgccgga
gcaggcaatttggattttctgcgaaacagtccacagtttcaagctttgagaactatggtg
caagcaaaccctcaaattctgcagcctatgctccttgagttggggaagcaaaatccacat
ctaatgcagctcattcaagcacatcaagctgacttcttacgcttgataaatgagcctgtt
gaggggggtggcgaagggaaccttttgggtcaattgggttcagcggcaatgccacaggct
gtgactgtcaccccagaggagcgagaggccattgaacgccttgaagctatgggttttgat
cgggccctagtattggaggtatactttgcatgcaataagaatgaggagctggcggcgaac
tatcttttggatcacatgcatgaatttgaggaatga
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