Rosa chinensis (China rose): 112188644
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Entry
112188644 CDS
T06020
Name
(RefSeq) glycosylphosphatidylinositol anchor attachment 1 protein
KO
K05289
GPI-anchor transamidase subunit GAA1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
112188644
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Gene cluster
GFIT
Motif
Pfam:
Gaa1
DUF1180
Motif
Other DBs
NCBI-GeneID:
112188644
NCBI-ProteinID:
XP_024183569
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All DBs
Position
2:86029258..86033310
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AA seq
742 aa
AA seq
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MAGAETDTDTSKAKPRPIVRLGIFLISHSFFFSVVFSAAGVLALLLLPVLAKNTYISENS
LMPGSVAPMLSDQEVAEANRLIDDLTALNSKPLGSVIGSRRLVAQYMSNSGAEVSFHKFH
PQINQFHPLHFFSSPDSRRIEQNVSCALHGVNTVGIIRAPRGDGKEAIVLVTPFNSAKVN
KNEALSLGIAYSVFSLLTRVPWLAKDVIWLVADSQFGEYAAVSAWLRDYHTPLFSGLGTI
DAEMCPESNNLHGMEENHFTERMTYDGFKRAGTMAAALVVKVGDRAHQYEDSLSIYAEAS
NGQMPNLDLINTVNYLAVHRQGLRVKVEKLRSFLDMGWLETLGEMFELLGHYARSINPQL
KFGIPAAEYIEGSATLASSLYYQALGVPTGPHGAFRDYQVDAITVEILPKVYTLGNRRQN
DFLLRSGRLIEGVVQSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFVLLVAPLPMVA
ASLFVNASNSDDSLNTEKPAPSATAADSAPLVTAYESSPLLSAANSSSLATTAGCITLSS
WKWLYAAKKSFVVYLWGSVVSLLPYFICQIPNCTPTTSFIIWVLLSILSLVVMYMILASP
FSDANNSRSQKEWAILKSVTMSAAFIGLCLMSIINFATAEIGGLLIVPMCLMAYPLKLDV
KTRSLRTISRAACNLVLGIVGFPPVTFIVLKGAFEGYSSISVGDFWSWVESLWVWNSATY
LYIGVVHLPSWVLCIHILFHHC
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccgagaccgacaccgacacctccaaggccaaaccacgacccatcgtacgc
ctcgggatcttcctcatctctcatagcttcttcttcagtgtcgtcttctccgccgccggc
gttttggctcttctgctgcttccggttctcgccaagaacacttacatctccgagaattcg
cttatgccaggctctgtggctcccatgctttccgatcaggaggttgcggaggccaataga
ttgatagacgatttgactgctttgaattccaagcctcttggttcagtaataggaagtcga
agactggtagcacagtatatgtcaaattcgggcgctgaagttagttttcacaagttccac
cctcagataaatcagtttcacccgctgcacttcttttctagccctgattcgagaagaatc
gaacagaatgtcagttgtgcattgcacggtgttaacactgttggaattataagagcacca
cgtggtgatgggaaggaagctattgttttggtgactcctttcaattcagcgaaagttaac
aagaatgaggccttatctttgggaattgcatactcagtattttccttgcttaccagagtt
ccctggctggccaaggatgtgatatggctcgttgcagattcccaatttggtgagtatgcc
gcagtttctgcttggctaagagattatcacactcctttattcagcggactgggcacaata
gatgcagaaatgtgtcctgaaagcaataatctgcatggaatggaagagaaccattttaca
gaaaggatgacttatgatggatttaaacgggctgggaccatggctgcagcccttgttgtg
aaggttggtgatcgggctcatcaatatgaggacagtctgagtatctatgctgaggcatcc
aatgggcagatgccaaatcttgacctcatcaatactgtgaattatttagcagtacatagg
caaggtttgcgggtaaaggtggagaaattgaggtctttccttgatatgggatggcttgag
actttgggtgaaatgtttgaattactaggccattatgctagaagcataaatccccaattg
aaatttggtatcccagctgcagagtatattgagggtagtgccacacttgcaagttcattg
tactaccaggctttgggtgtacccactggtccccatggtgcttttcgtgattaccaagtt
gatgcaattactgtggaaattttgcctaaagtttatactttgggtaacagaagacaaaat
gacttccttctgcgaagtggccgattaattgaaggagttgtgcaatctgtaaacaacctt
ctagaaaagtttcaccagtcattttttctatacctattaacatctcccagtaaatttgtg
tcggtgggagtctacatgattgcttttgtactactagttgcaccgctccccatggtggct
gcctctctctttgtaaatgccagtaactctgatgatagtctgaatacagagaaacctgct
ccttcagccactgctgctgactctgctcctttggtcactgcttatgagtcttctccttta
ctcagtgctgctaattctagttctttggccactactgctggttgcatcactctcagctca
tggaaatggctttatgcagcaaagaaatcttttgttgtctacttgtggggctctgttgtt
tcgttactcccgtatttcatctgtcaaatacccaattgcactccaacaaccagctttata
atctgggttttgctttcaatactcagccttgtggtcatgtatatgattttggcttctcca
ttttctgatgctaataactctcgatcacaaaaagagtgggccatcctaaaatcagtgact
atgtcagctgcattcattggtttgtgtctcatgtcaatcatcaacttcgctacagcagaa
attgggggcttactgattgtccccatgtgtttgatggcttatcctttgaagcttgatgtt
aaaactaggagcttgagaacaatttcaagagcagcttgtaatctcgttctggggattgta
ggatttccaccagttacttttatagttctgaaaggagcattcgagggttacagcagcatt
agtgtcggtgacttctggtcttgggtggagtctctgtgggtttggaatagtgccacttac
ctatatattggtgtggtacacctgccatcctgggttttgtgtattcatatattgtttcac
cactgttaa
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