Rosa chinensis (China rose): 112188853
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Entry
112188853 CDS
T06020
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00600
Sphingolipid metabolism
rcn01100
Metabolic pathways
Module
rcn_M00094
Ceramide biosynthesis
rcn_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112188853
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112188853
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
112188853
Amino acid related enzymes [BR:
rcn01007
]
Aminotransferase (transaminase)
Class II
112188853
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
112188853
NCBI-ProteinID:
XP_024183850
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All DBs
Position
2:88198713..88202685
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AA seq
488 aa
AA seq
DB search
MIAIPYLTALTTYFSYGLLFAFGQVRDFFRKFIDWWSSNNLQGYAPICLGLEDFYVRRLY
LRIQDCFNRPIASAPDAWFDVVERYSNDYNKTLKLTSNTSRCLNLGSYNYLGFAAADEYC
TPRAIQTLKKYSPSTCSSRVDGGTTALHNELEKCVANFVGKPAAIVFGMGYVTNSAILPV
LIGKGGLIVSDSLNHNSIVNGARGSGASICVFQHNTPSHLDEVLREQIAEGQPRTRRPWK
KIIVIVEGIYSMEGELCKLPEIIAICKKYKVYTYLDEAHSIGAVGKSGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKYTCPAHLYATSISPPAAEQIISSIKVLLG
EDGSNRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
QNVAVVTVAFPATPLLLARARICISASHTREDLQKALDVIGRVGDLVGIKYFPAEPKKLQ
EEEPLKLD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaattccctatttgaccgcgttaaccacctacttcagctatggcttgctcttc
gcttttgggcaagtcagagatttcttcagaaaattcatcgactggtggagctctaataat
ctccagggttatgctccaatctgtttaggacttgaagatttctacgtccgtcgtctctat
cttcgaattcaggactgtttcaataggcctattgcaagtgctcccgatgcttggtttgat
gtggttgaacgttactccaatgactacaacaagacactcaaactaacctcaaacacaagc
cgatgccttaacttgggatcttataactaccttggctttgctgccgccgatgaatattgc
acgcctcgtgccatccagacattgaagaaatattctcccagtacctgtagtagccgagtt
gatggcggcactacggctttgcacaatgaactggagaagtgtgttgcaaattttgttgga
aaacctgctgctatagttttcggcatgggttatgtcaccaactctgctatccttcctgta
ctgattggaaagggaggtttgattgttagtgattctttgaatcataactccattgttaat
ggcgcacgaggatctggagcatccatttgtgtcttccaacacaacactccatcccatttg
gatgaggttttaagagaacaaatagcagagggacaacctagaacccgcaggccttggaaa
aagattattgtcattgtggagggcatatacagcatggaaggggagctttgcaaacttcct
gagattatagcaatctgcaagaaatataaggtctatacgtatttggatgaggcccacagt
attggagctgtaggaaaatcaggacgaggtgtttgtgagctcttgggagtagatactgct
gatgttgatatcatgatgggaacatttaccaaatccttcggatcatgtggtggctatatt
gcaggatccaaggacctcatccaatacctgaagtacacttgccctgctcatctttatgca
acttccatatcaccaccggctgcagaacaaataatatcatccattaaggtcttacttgga
gaggatggttctaacagaggtgcccagaaactcgcacgaataagggagaatagcaacttt
ttcaggtcagaactgcaaaaaatgggttttgaggttttgggggataatgactccccggta
atgccaattatgttgtacaacccagccaaaattcctgccttctcacgggagtgccttaaa
cagaatgtagctgtcgtgacagtagcctttcctgcaaccccactgctgttggcaagggca
cgtatctgtatatctgcttctcatacaagggaagacctacagaaagccttggacgttatt
ggcagagttggtgatctggtgggtataaaatacttccctgctgagccaaagaagctgcag
gaagaagagccgctgaagttggactga
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