Rosa chinensis (China rose): 112188905
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Entry
112188905 CDS
T06020
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112188905
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112188905
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112188905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING-like
zf-RING_16
FANCL_C
zf_RING_Vps8_fungal
Peptidase_M56
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
112188905
NCBI-ProteinID:
XP_024183903
LinkDB
All DBs
Position
2:complement(31077716..31078903)
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AA seq
235 aa
AA seq
DB search
MPASASASHQLHDLLGDFYSRRLLLHNPLYPPPISPSSTSHDTSSSSPDQYPGDNSFDAN
VVMVLSVLLCALICSLGLNSIIKCALRCSSFVSSESSSSSRDNSARLANTGVKKKALKTF
TTVNYSAELKLPGLDSECIICLSEFTTGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCR
HSLIETCQKIVGFSQADSSSETTRALPVQETTVSIAALEPEGFIRNYRGIISQAS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttctgcttctgcttctcaccaacttcacgatcttcttggggacttctactcc
aggagactactcctccacaacccactttaccctccacccatctctccatcttcaacctcg
cacgacacatcttcgtcctctcctgatcagtaccccggagacaacagcttcgatgctaat
gtggtcatggtgctctctgtcctcctctgcgccctaatttgctctttggggctcaactcc
atcataaagtgcgctctgaggtgctcgagcttcgtgtcctcggagtcttcttcttcctca
agagacaactcggcgaggctggccaacaccggagtcaagaagaaagctctcaagactttt
acgacggtgaattactcagctgagcttaagcttcccgggttggacagtgagtgcataatt
tgtttgtcggagtttacaaccggcgagcgcgtgcggctacttcccaagtgtaaccatgga
ttccatgtgaggtgcatcgataagtggctgagctctcactcttcgtgccctaaatgccgg
cacagcttgatcgagacgtgtcagaagatcgttggcttcagccaggcagatagctcgtcg
gagacaactcgtgctcttcctgtgcaggaaactacagtaagcattgcagcgcttgaacct
gaagggtttattcgtaattataggggaattattagccaagctagctag
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