Rosa chinensis (China rose): 112188928
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Entry
112188928 CDS
T06020
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112188928
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112188928
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
112188928
NCBI-ProteinID:
XP_024183937
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Position
2:complement(27995329..27997212)
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AA seq
391 aa
AA seq
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MANPRSHIFLSLLFLFINSGASTAVTYNVADLGAKPDGQTDSIKAFLSAWAEACASANPS
VIYVPAGRFLLRNAVFSGPCKNIAITFRIAGTLVSPSDYRVIGNAGNWLLFEHVNGITIS
GGILDGQGTGLWDCKANGNSCPSGATTLGFSNSNNIVVSGLTSLNSQMFHIVINGCNNVK
MQGVRVSASGNSPNTDGIHVQQSSGVTILDSKIATGDDCVSIGPGTTNLWIENIACGPGH
GISIGSLGKDQQEDGVQNVTVKTVTFTGTQNGVRIKSWGRPSTGFAKNILFQHAVMVDVQ
NPIIIDQNYCPGEKGCPGQVSGVQISDVTYQDIHGTSATEVAVKFDCSSKYPCNKITLND
VKLNYKNQAAEASCSHAGGTAEGTVQPTSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcccagaagccacatttttctctcactcctctttctcttcataaactccggc
gcctccactgcagttacttacaatgtggccgatttaggagccaaaccagacggccagacc
gactcaatcaaagccttcctttctgcatgggccgaagcttgtgcctcggccaatccctcg
gttatttatgtcccggccggaaggttcttgcttcgcaatgcagtcttcagcggaccatgt
aaaaacatagccatcacatttcgcattgccggcacactcgtgtccccgtcggattaccgg
gtcataggaaatgccggtaactggcttttgtttgagcatgtgaatgggattacaatctcg
ggtggaattcttgatggacaaggcactggtctgtgggattgcaaagccaacggcaatagt
tgccccagcggagcaactacgcttgggttttccaactccaacaacattgtcgtgagcgga
ttgacctccctaaacagccaaatgtttcacatagtcatcaacggctgcaacaacgtgaaa
atgcaaggtgttagggtttctgcctccggtaacagcccaaacaccgacggaatccacgtc
caacagtcctcgggcgtcactattctcgactctaaaattgcaaccggtgacgactgtgtc
tccattggtcctggaaccactaatttgtggatcgaaaacattgcatgtggaccaggccat
ggtatcagcattggaagtctaggcaaggaccagcaggaggatggtgtgcaaaatgtaaca
gtgaaaactgttacatttactggtactcaaaatggtgtgagaattaaatcatgggggaga
cctagcacggggtttgccaagaacattcttttccaacacgctgtgatggtcgatgtccaa
aatcctatcatcattgatcaaaattactgccctggcgagaaaggttgtcctggtcaggtt
tcgggagttcaaattagcgatgtgacatatcaagacatccacgggacatcagcaacagaa
gttgcggtgaaattcgactgtagttcaaagtatccttgtaacaagatcacattgaatgat
gtgaagctcaattacaagaaccaagcggccgaagcttcatgtagccatgccggtggaacg
gctgagggtacggttcaacctacaagttgtctgtag
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