Rosa chinensis (China rose): 112189069
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Entry
112189069 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112189069 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112189069
Membrane trafficking [BR:
rcn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112189069
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112189069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Synaptobrevin
WDR55
NBCH_WD40
Beta-prop_IP5PC_F
eIF2A
Motif
Other DBs
NCBI-GeneID:
112189069
NCBI-ProteinID:
XP_024184109
LinkDB
All DBs
Position
1:complement(59916174..59924630)
Genome browser
AA seq
1232 aa
AA seq
DB search
MLAKLFKRPSQKQHHPQARVSQADLDPRIVFHYGIPSTASILALDRTQSLLAIGTLDGRI
KVIGGDNIEGLLISPEPLAFKYLEFLENQGFLASVSSENEIQVWDLEQKQIAGSLQWECN
ITAFSVIYGTNYMYIGSEYAMVSMVKYDAEDRKINLLPYYITANFIAEAAGMSLPDNLSV
VGVLHQPSSQGNRLLIAYENGLIVLWDALEDQVVLVRGSKDLQVKEETVHNSFEGTRTEL
TDATSDSKQVEKEISSLCWVCDDGSSLAVGYVDGDIMFWDISTAESTQDHRSKKLANNVA
KLELSSDDKRFPVIVLHWSANRLSHHPRGQLFVYGGEGIGSEEVLTVLSVDWSSGIESLK
CIGRVDLTLVGSFADMILLPAAGAMENGETLLFTLTNQGQLHVYDKACWSALMSHQKKRT
DGTAVQSPTFIPTTEPCMTVAKLALVDRDGKYSSALSKEVSVDKSNAKHTLKKGGAKWPL
TGGVPSQLSDAENFHVERLYVAGYQDGSVRLWDATYPTPSLIYAIGPEVKGIRSTGANGT
VSALEFCSLTLKLAIGDVCGLVRLYKLIGSSDETELHFVTKTEKEVYTSQQGNGPRCTAV
FSILDSPISILQYANFGARLTVGYECGRVAMLDISTSSVLFLTDSVSNSSSPVICLSVKS
FSDTNSISQSPKGSESKNSTDPQNGMNPKDSESKTLSDSGNELAIPKDSESKNVADPEHG
MRVKDAEFKTLSDSGNGLAIPENSESKNVADPEPGMSVKDPESQTLSDSGNELAIPKDSE
SKNVTDPEHEDPESKTLSDSENGLAFIMTRNAHVVILDSATGNMIRSWPMHPKMDSTAIS
MYIIEDGDVLFDLSSAKKDSLDLPQKGVAKHDDVPPNADSGGTQLVVDQDTSTKTAYFLQ
RSVNMCVLLCCDYTLHLCSLKSLLEGDSNCILKVNLVKPCCWTTIFKKDGKDSGLVILNQ
TGVFEIRSFPNLEVVRDISLMTILRWNFVINMDKTFCSSDRGQMILVHGCELAFVSLLAY
EDDFRISESFPCLHDKVLAAATDVIADLSQRQKQSAAHRILGGIIKGLKTGKTDQNMDPT
GNHEKYCANLESLFSNPPFLKPSTDVKDGQEPVVLNLDDIVIDGPITVLPKDPNKKNEKK
ADKGSEKKKLFEGATSDTKPKMRTAAEIKAKYRETGDVSAAAARARDMLAERGEKLEKLR
ENTEELSSGAQDFASMAKELAKRMENRKWWHI
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgttggctaaactcttcaaaagaccctcacaaaaacaacatcatcctcaggcaagggtg
tcacaagctgatttggatccaagaattgtttttcactatgggattccatctactgcatcg
attctcgcacttgatcgcacgcagagcttgctggcaattggaaccctggatggcaggata
aaagtgatcggtggcgataatattgaagggcttctgatatctcctgagccattggccttt
aaatacttggagttcttagaaaatcaaggttttttagctagtgtctcaagtgaaaatgaa
attcaggtttgggatttggaacagaagcaaatagccggttctttacagtgggaatgcaat
ataactgccttctctgttatttatggcaccaattacatgtatattggaagcgaatatgca
atggtgtctatggtgaagtatgatgctgaagatcgaaaaatcaatttactgccatattat
attactgcaaacttcatagctgaagcagctggaatgtcattgcctgataatctttctgtt
gttggagttctccatcaacctagttctcagggaaacagactgctgattgcatatgagaat
ggtctgattgttctctgggatgctttagaagatcaagttgtgcttgtaagaggttccaag
gacctgcaagtgaaggaagaaacagtccataattcttttgaaggcacaagaactgagctg
actgatgctacatcagacagcaaacaggtggagaaagagataagctctctttgttgggta
tgcgatgatgggtcaagtcttgctgttggctatgtagatggtgatataatgttttgggat
atatcaactgctgagtctacccaggatcatagatctaaaaagttagctaacaatgttgcg
aagctagagttatcatcagatgacaagagattccctgtcatagttttacactggtctgca
aataggttaagtcatcatcctaggggccaactctttgtttatggaggtgaaggaattggg
tctgaagaagttctcacggttctgagcgtggattggtcttcaggaatagaaagtctgaaa
tgcataggtcgtgtggaccttacacttgttggttcatttgcagatatgattttacttcca
gcagctggtgcaatggagaacggtgaaacattgctattcactttgacaaatcagggacaa
ctgcatgtctatgacaaggcttgctggtctgccttaatgtctcaccaaaagaaaaggact
gatgggactgcagtgcagtctcctacgtttatacctactactgaaccgtgtatgactgtg
gcaaagcttgctttggtggatagagatgggaaatactcctcagctttgtccaaggaagtt
tcagttgacaagtctaatgcgaaacacactttgaagaaggggggtgcaaagtggcctttg
actggtggtgttcccagccaactttctgatgctgaaaattttcatgtcgagagactatat
gtagcaggatatcaagatggatctgttcgactatgggatgccacctatccaactccgtcg
cttatatatgctataggtcctgaggtaaaaggcatcagatctacaggtgcaaatggaaca
gtctcagcattggaattttgttctcttactttaaaattagctattggtgatgtgtgtggt
ctggttcgtctatataaactaattgggagttcagatgagacagaattgcactttgtgaca
aaaacagagaaggaagtttatacttcacaacaaggtaatgggcctcggtgcacagctgtg
ttttctattcttgattctcctatatccatactacaatatgcaaattttggagcaagactg
actgtgggatatgaatgtggccgggttgcaatgcttgatattagtacatcgtcagttttg
tttcttacagacagtgtctccaactcaagttccccagtcatctgtctgtctgtgaaatca
ttttcagatactaatagcatatcacagagcccaaagggctctgaatccaagaattcgact
gatcctcaaaatggaatgaatccaaaggattctgaatccaaaactttaagtgattctgga
aatgagttggcaatcccaaaggactctgaatccaagaatgtggctgaccctgaacatgga
atgagagtaaaagatgctgaatttaagactttgagtgattctggaaatgggttggcaatc
ccggagaactctgaatccaagaatgtggctgatcctgaacctggaatgagtgtaaaagat
cctgaatcccagactttgagtgattctggaaatgagttggcaatcccaaaagactctgaa
tccaagaatgtgactgatcctgaacatgaagatcctgaatccaagactttgagtgattct
gaaaatgggttggcgttcattatgaccagaaatgcacatgttgttattttagatagtgcc
actggcaatatgatcaggtcttggcccatgcatccaaaaatggattctactgcgatttcg
atgtacattatagaggatggtgatgttttatttgatttgtcgagtgcaaaaaaggattct
ttagacttacctcagaaaggcgtagctaaacatgatgacgtaccacctaatgctgactct
ggagggacacagcttgtagttgaccaggatacctccaccaaaactgcatattttttgcag
agatcggtgaacatgtgtgttttactttgttgtgactacacattgcacttatgttcattg
aagtctctgcttgagggtgatagtaactgcattctgaaggtgaatcttgtaaaaccgtgt
tgttggactacaatcttcaaaaaagatggaaaagacagtggattggttatactaaatcag
acaggagtctttgagatcaggtcttttccaaatcttgaagtggtcagagatatatcatta
atgacgattctaagatggaacttcgtgatcaacatggataagacattctgttcctctgat
cgtgggcaaatgattctggtacatgggtgtgaattagcttttgtatctcttttggcctac
gaagatgacttcaggatttcggagtccttcccttgtcttcatgataaagtgcttgcagct
gctacagatgtcattgctgatttatctcaaagacagaaacagagtgctgcccataggatt
ttaggaggtatcattaagggcttaaaaactggtaaaacggatcaaaacatggacccgact
ggaaatcatgaaaaatattgtgcgaatttggagagcttattttcaaatcccccattctta
aaaccttccacagatgtgaaggatggccaagaacccgtggtgcttaacctagatgatatt
gtaattgatggccctattactgtcttgcctaaagatccaaacaagaagaatgaaaagaaa
gcagacaagggatcagagaagaaaaagttatttgaaggcgcaactagtgatacaaagcca
aaaatgaggacagctgcagaaatcaaggctaaatatagagaaactggggatgtctctgca
gcagctgcacgtgcaagagatatgcttgccgaacgtggggaaaaacttgagaaactcaga
gaaaacacagaagaactatcgagtggagctcaagacttcgcatcgatggcaaaggaactc
gccaagagaatggagaatcgtaaatggtggcacatatga
DBGET
integrated database retrieval system
