Rosa chinensis (China rose): 112189179
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Entry
112189179 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112189179
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112189179
04121 Ubiquitin system [BR:
rcn04121
]
112189179
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112189179
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112189179
Membrane trafficking [BR:
rcn04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112189179
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112189179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
112189179
NCBI-ProteinID:
XP_024184221
LinkDB
All DBs
Position
2:complement(30469514..30475220)
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AA seq
599 aa
AA seq
DB search
MKFEREVTLKSLARQFQHGFKTLSRSSGLHISVAGLLGIAGLVLALKDSKLGKLSSLQWL
PKNERGDPNLHLVPGLQNLGNNCFLNVILQALASCSYFQPFLQKVLEESEFLAVEDSADC
VPLTISLAALLEDLCAVGGGRVVLSPRRVMLAITHYIENFDLTSEQDAAEAFLHLLSSLR
EEFSDFYCPTQGSIVEVLASNGRIITPKRTESQSEQERWQQRFFGPFDGILGSILTCRSC
SSQISLNFESFHSLPLSPVLDGGATIMAGCTLEDCLKQFTAAEQVENYHCSHCWHIAAVK
YLLSMGGNEAAIEKIESCTEQDSCDCQRLFHLESLPWSNRFSRTLKQISIARCPKILCIH
LKRVSINVFGELVKLQGHIYFPLVLDLLSFMTSGVGIKHWEKNQKTGRVWLQRENPRPNH
FNLECDPRKLNIVRGLARGSTFQEELASDVSQFTANAQDSAGEFNFPPTGGFPKTMPTGT
NQQNRTCELVPSDTCLYRLVAVVEHFGRAGSGHYTVYRSVGADSCMEQPHDQFDSSTARW
FSISDSEVCSVSKEHVLAAEASLLFYERKKHFKIARAMLRLLQLERATNVQVVRLVNSI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgagagagaggtcactctaaagtcattggctcgccaattccaacatgggttt
aagacgctttctcgttcttctggacttcacatatctgtagctggtcttcttggtattgct
ggtctcgttttggctctcaaagactccaaattgggcaagctcagcagcttacagtggcta
cccaagaacgaacgtggtgatcccaacttgcatttggtacctgggttgcaaaaccttggg
aacaattgtttcctgaacgtgattttacaggctctggctagttgttcatactttcaacct
tttcttcaaaaggttttagaggagtctgagttcttagcagttgaggattccgcagattgc
gtgccgcttacaatatctttagctgcattgttagaagacctatgcgcagttggtggagga
agagttgtattgagtccacggcgagtgatgcttgccataacacattacattgagaacttt
gatctaacaagcgagcaggatgcagcagaagcatttcttcaccttctgtcctctttaaga
gaagaattctcagatttttattgtccaactcaaggttctatagtggaagtcttagcctct
aatggtaggattattactccaaagagaacggagagccaaagtgagcaggaaagatggcag
caacgcttctttggaccatttgatggaattcttggcagtatcctaacctgtcgaagttgt
tcatcgcagatatcattgaattttgaatcttttcacagcttgcctctttcaccagtgctt
gatggtggtgccacaattatggctggatgtaccttagaggattgcctgaagcagtttact
gctgctgagcaagttgagaattaccactgcagccattgttggcatattgctgcagtcaaa
tatttattatctatgggaggaaatgaggcagcaattgaaaagattgagagttgcactgag
caagattcctgtgactgtcaaagactttttcatctagaatcactaccatggtcgaatagg
ttttcacgcactctaaagcaaataagtattgctcgctgcccaaagattttgtgcattcac
ctaaaacgcgtttcaatcaatgtatttggagaacttgtaaaactacagggccatatttat
tttccattggttttggaccttttaagtttcatgacaagtggggtgggaataaagcattgg
gagaaaaaccagaaaacagggcgagtctggctacaaagagaaaaccctcggcccaatcat
ttcaatttagagtgtgatccaagaaagttaaatattgtccggggactagcaagaggaagc
accttccaagaagaattagcttcagatgtatctcagttcactgcaaatgcacaagattca
gcaggagaattcaactttcccccaactggaggctttccaaaaaccatgcctacaggcaca
aaccagcagaataggacttgcgaattggttccttcagatacttgtttgtaccgtcttgtt
gctgttgtggagcactttggaagagctggaagtgggcattacactgtttatagaagtgtg
ggagctgattcatgtatggaacaacctcatgatcaatttgactcttctactgcccgctgg
ttttctatttcagattcagaggtgtgcagtgtttcaaaggaacatgttcttgccgcagaa
gctagcttgcttttctatgaaaggaaaaagcactttaagatagcaagggcaatgctgaga
cttctgcaacttgagagggctacaaacgtccaagtagtgaggctagttaactcaatttaa
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