KEGG   Rosa chinensis (China rose): 112189190
Entry
112189190         CDS       T06020                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03020  RNA polymerase
rcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112189190
  09124 Replication and repair
   03420 Nucleotide excision repair
    112189190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112189190
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112189190
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112189190
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112189190
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112189190
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112189190
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Sod_Cu Vg_Tdu
Other DBs
NCBI-GeneID: 112189190
NCBI-ProteinID: XP_024184231
LinkDB
Position
2:43964378..43965946
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPASV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtttttccatatagtcttggagaggaacatgcagcttcaccctcgccactttggccgc
aatctccgggagaatttggtagccaagctcatgaaagatgtagaagggacttgcagtggc
caacatgggtttgtggttgccataacggggattgagaacatcggaaaagggctgattcgt
gatggcacagggtttgtttcatttccagttaagtatcagtgtgttgttttcagaccattt
aagggagagatcttggaagccgtggttacaatggtgaacaagatgggtttttttgctgag
gctggtccggttcagatctttgtttcgaaccatttgataccggatgatatggagtttcag
tctggtgatatgccaaactatacaacatcagacggatctgttaagattcagaaagatagc
gaagttaggttgaagataattggaacccgagtggatgcaacagaaattttctgcattggt
actatcaaagatgatttcttgggcgtcataaacgatcctgcgagtgtttag

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