Rosa chinensis (China rose): 112189293
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Entry
112189293 CDS
T06020
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112189293
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112189293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
112189293
NCBI-ProteinID:
XP_024184362
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All DBs
Position
2:86108339..86112671
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AA seq
511 aa
AA seq
DB search
METSNPRSFFQGIRSRELHGSRVPKRSYIDCLASDFSEIGAIAAEHNGPPMAISFGKTSR
NSHIVAMSDEDGYLSLFDTRRKFSASASHRENADRTKVYDWVVHQNAVFDICWIKDDTQI
VTASGDQTVKVWDIQEKKCTAVLVGHTGSVKSLSPHPTNPEIIVSGSRDGSFALWDMRCN
STSKNTLAELCICPTAVVNGAHLTPRAKRSRRGKAAPRSITSVLNLKDEVSIATAGAVDS
VVKFWDTRSLKSIVTQTCPHMESNEKERRFHGITSLSQDLNGVFVSASCMDNSIYLYNVL
QLEKGPMQSFSGGRIESFFVKSAISPDAAHILSGSSDGNAYIWQVNKPQEDPVILKSHDG
EVTAVDWSHFEVGKIATSSDDFTVRLWNSENRYCPSTPSPSAIRRRIMAIPGAECRRLLM
NESMHISKDSRNSCPLDEGLDESNSLHPIKMPKICTPESQKKQSKLDSDMSEMFEKTPEA
TLKSPSSVLNPPSSLKRKTIRDYFAAPTLNL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcaaatccccggtcgttcttccaaggcatcagatccagagagctacacgga
tcccgagttccgaagcggtcctacatcgattgcctggcttcggatttctccgaaattgga
gccattgcagccgagcacaacggacctccgatggccatttcgttcggcaagaccagtaga
aactctcacatcgtcgccatgtctgatgaggatgggtacctgagcttgttcgatacgcgt
cgcaagttctcggcatctgcatctcaccgggaaaatgcagatagaaccaaggtttacgac
tgggttgtgcatcaaaatgccgtgtttgacatctgttggataaaggatgatactcagatt
gtgacagcttctggtgatcaaactgtcaaggtatgggatattcaggaaaagaaatgtact
gcagttctggtggggcacactggcagtgtgaagtctttgagtcctcatccgactaatcct
gagattatcgtctccggttcaagagatggctcctttgctctctgggatatgagatgtaat
tcaacatccaaaaatacgcttgcggagctctgcatatgcccaactgctgtggttaatggg
gctcatctaaccccacgagcaaagcgttcacggcgtggaaaggctgctccaaggagcatc
acatcagttcttaatcttaaagatgaggtttccattgctactgctggagctgtggacagt
gttgtcaagttctgggacactagaagtttgaaaagtatagtcacacagacatgtcctcat
atggagtcaaatgagaaggaaagaagatttcatggcataactagcttatcccaagattta
aatggagtgtttgtttcagcctcttgtatggacaacagcatttatttgtataatgtgctt
cagctagaaaagggtcctatgcaatccttctctggaggccggattgaatctttttttgta
aagtcggctattagccctgatgctgctcacatactcagtggttctagtgatggaaacgcc
tacatttggcaggtaaacaagcctcaagaagatccagtaatattgaaaagccatgacgga
gaagttacagcagttgattggtcccattttgaggttgggaagatagcaacttcttcagat
gattttacggttcgcctctggaactctgagaatcgttactgcccaagcacaccatcacca
tctgcaattcgaagaagaataatggcaatcccaggtgcagaatgtagaaggcttctgatg
aatgaatcaatgcatatctcaaaggattccagaaattcctgtcccttggatgaaggacta
gatgaaagtaactcacttcatccaattaaaatgcctaaaatctgtactcctgaatcacag
aagaagcaatccaagttagattctgacatgagtgaaatgtttgaaaagacccctgaagct
acattaaagagcccctcttctgttctgaaccctccctcctctctaaaaaggaaaactatc
cgtgattactttgcagcacctactctgaacttgtag
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