KEGG   Rosa chinensis (China rose): 112189293
Entry
112189293         CDS       T06020                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112189293
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112189293
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_EML EIF3I Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st ANAPC4_WD40 MIOS_WD40 WD40_RFWD3 Beta-prop_WDR11_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 WD_LRWD1
Other DBs
NCBI-GeneID: 112189293
NCBI-ProteinID: XP_024184362
LinkDB
Position
2:86108339..86112671
AA seq 511 aa
METSNPRSFFQGIRSRELHGSRVPKRSYIDCLASDFSEIGAIAAEHNGPPMAISFGKTSR
NSHIVAMSDEDGYLSLFDTRRKFSASASHRENADRTKVYDWVVHQNAVFDICWIKDDTQI
VTASGDQTVKVWDIQEKKCTAVLVGHTGSVKSLSPHPTNPEIIVSGSRDGSFALWDMRCN
STSKNTLAELCICPTAVVNGAHLTPRAKRSRRGKAAPRSITSVLNLKDEVSIATAGAVDS
VVKFWDTRSLKSIVTQTCPHMESNEKERRFHGITSLSQDLNGVFVSASCMDNSIYLYNVL
QLEKGPMQSFSGGRIESFFVKSAISPDAAHILSGSSDGNAYIWQVNKPQEDPVILKSHDG
EVTAVDWSHFEVGKIATSSDDFTVRLWNSENRYCPSTPSPSAIRRRIMAIPGAECRRLLM
NESMHISKDSRNSCPLDEGLDESNSLHPIKMPKICTPESQKKQSKLDSDMSEMFEKTPEA
TLKSPSSVLNPPSSLKRKTIRDYFAAPTLNL
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggagacctcaaatccccggtcgttcttccaaggcatcagatccagagagctacacgga
tcccgagttccgaagcggtcctacatcgattgcctggcttcggatttctccgaaattgga
gccattgcagccgagcacaacggacctccgatggccatttcgttcggcaagaccagtaga
aactctcacatcgtcgccatgtctgatgaggatgggtacctgagcttgttcgatacgcgt
cgcaagttctcggcatctgcatctcaccgggaaaatgcagatagaaccaaggtttacgac
tgggttgtgcatcaaaatgccgtgtttgacatctgttggataaaggatgatactcagatt
gtgacagcttctggtgatcaaactgtcaaggtatgggatattcaggaaaagaaatgtact
gcagttctggtggggcacactggcagtgtgaagtctttgagtcctcatccgactaatcct
gagattatcgtctccggttcaagagatggctcctttgctctctgggatatgagatgtaat
tcaacatccaaaaatacgcttgcggagctctgcatatgcccaactgctgtggttaatggg
gctcatctaaccccacgagcaaagcgttcacggcgtggaaaggctgctccaaggagcatc
acatcagttcttaatcttaaagatgaggtttccattgctactgctggagctgtggacagt
gttgtcaagttctgggacactagaagtttgaaaagtatagtcacacagacatgtcctcat
atggagtcaaatgagaaggaaagaagatttcatggcataactagcttatcccaagattta
aatggagtgtttgtttcagcctcttgtatggacaacagcatttatttgtataatgtgctt
cagctagaaaagggtcctatgcaatccttctctggaggccggattgaatctttttttgta
aagtcggctattagccctgatgctgctcacatactcagtggttctagtgatggaaacgcc
tacatttggcaggtaaacaagcctcaagaagatccagtaatattgaaaagccatgacgga
gaagttacagcagttgattggtcccattttgaggttgggaagatagcaacttcttcagat
gattttacggttcgcctctggaactctgagaatcgttactgcccaagcacaccatcacca
tctgcaattcgaagaagaataatggcaatcccaggtgcagaatgtagaaggcttctgatg
aatgaatcaatgcatatctcaaaggattccagaaattcctgtcccttggatgaaggacta
gatgaaagtaactcacttcatccaattaaaatgcctaaaatctgtactcctgaatcacag
aagaagcaatccaagttagattctgacatgagtgaaatgtttgaaaagacccctgaagct
acattaaagagcccctcttctgttctgaaccctccctcctctctaaaaaggaaaactatc
cgtgattactttgcagcacctactctgaacttgtag

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