KEGG   Rosa chinensis (China rose): 112189311
Entry
112189311         CDS       T06020                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcn03036]
    112189311
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112189311
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    112189311
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112189311
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT HEAT_2 HEAT_EZ
Other DBs
NCBI-GeneID: 112189311
NCBI-ProteinID: XP_024184381
LinkDB
Position
2:complement(58032745..58043867)
AA seq 1146 aa
MASTSELTQHLECYVDTARPPADQAASLNFITSLVNKDLLTIEVLVKEMRMYLTITDNVI
RARGILLLAEVLTGLSSKPLDNATIHSLIGFFTDRLSDWRALRGALVGCLALLRRQANAG
TVSASDAKVVALSYRENLPVQSLAQQDRKLCFELLECLLQRYPNEVASLGEDLFYAISEA
VDGEKDPHCLILAFHIVEVLVQIFPDPSGPLASFCGDLFEFLGCYFPIHFTHLKDEDADV
RRDDLSKALMSAFSSTALFEPFVIPLLLEKLSSSLPLAKVDSLKYINYCASRYGAERMAK
HAETIWISIKRAISNSLEVPAKSFTSEPLLGLGFQENEIATEALILLQKVTMQNEALFLN
LVVRDEDINNVFNSIASHESYTNIPLQGRQSLHAVGRILCIITKTSMASCNRVFESFFPC
LMNTLEISMGNSSKDFTLNENSFSSKRFNFGALYLCVEFIAACRDLIMRTNEHAEKFGTA
DETCCYMLQSSAPTLITTLAKSSNDVVDDADIYFKVKGLQMLVTFPGYFLQTPTAMFENV
LKTLMSIILVDFDKSLLWKLALKALVHIGSFVDMDHESEKAQIYISFVVEKTISLVSQDD
FNVPFPLKLEAVSEIGASRPNHMLKIVQGLEDAIVANLSKIYVHGDLKSAEKTIQLFECY
SNKIISWIDETGGLEEVLYRFVISIWNCVDRCKDSSNQVQDKGLLDATMMAMKLAVGSCS
EESQNIIIQKAYGALSSGISIPFKDSMDDSSSVKLENLHLSEQLDKFSLRDEWILSLFAS
VIIAMRPRTHIANAKGILHLFMTALVKGCTPAAQALGSVINKFGTPSNEVATSTGCTLEE
AMEIIFRSKLWNITEDGVLRGSGTSHSSKVGLTELCLGFSSNKLLQVHAITGLAWIGKGL
LLIGHEQVKDVTKIILECLLADDRIGDSELRQGLLETSRELPSVMRSAADAFHILMSDSD
VCLNRKFHAKIRPLYKQRFFSTVMPILHSLIVKSDSSLSRSMLFRASAHLISNAPLIVIL
SDAKKLMKVLLDGLSILSEDILDKDKLYSLLLVLSGILTDKCGEEAVLENAHILIDCLTR
LIAYPHMMLVRETAIQCLLAMSELPRPRIFPLKTQVLQAIFKALDDPKRAVRQEAVRCLH
AWTSIA
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggcgtcaacgagcgaattgactcagcaccttgagtgttacgtcgacacagctcgccct
cccgccgaccaggctgcgagcttgaatttcatcacttctcttgtgaacaaggacttattg
actattgaagtgctggtgaaggagatgaggatgtatctgaccatcacggataatgttatt
cgtgctcgtggtatacttcttttggcagaagttcttacaggtctttcatcaaagccacta
gataatgcaactattcatagcttgataggattcttcacagacaggctgtcagattggaga
gctttacgtggtgcacttgttggttgcttagcactgctgaggagacaagctaatgctgga
actgtctctgccagtgatgcaaaagttgttgctctgtcttacagagagaacctaccggtg
caatctttagctcaacaggacagaaagctttgttttgagcttttggaatgccttttacaa
cgctatcccaacgaggttgcttcactgggtgaagaccttttctatgcgatctctgaagcc
gttgatggagaaaaggatcctcattgcttaatattagcatttcatattgttgaggttctg
gtccaaatatttccagacccatcggggccacttgcaagtttctgtggagatctatttgaa
ttcttgggttgctactttcccattcattttactcatctgaaagatgaggacgctgatgtg
agaagggatgacctctcgaaggcactaatgtcagcattctcgtccacagctttatttgag
ccatttgttattccgttgcttcttgagaaactttcttcttctctgccattagcaaaggtt
gattctttgaagtatattaactactgtgcatctagatatggagctgaaagaatggcaaaa
catgctgaaactatctggatttctataaaacgtgcaataagtaattcattggaagtgcct
gctaaatcctttacttcagaaccactacttggtcttggctttcaagagaatgaaattgca
acagaagcacttattcttctacaaaaggtcaccatgcaaaatgaagctttgtttctaaat
ttggttgttcgggatgaagatataaacaatgttttcaattccatagctagtcatgaaagt
tacactaatattcccttgcaaggcaggcagagtttacatgcagttggtcgcatcctttgt
atcataaccaagacttccatggcttcctgtaatagggtattcgaaagtttcttcccttgc
ctaatgaacactctggagatttcaatggggaattcatctaaggattttactcttaatgag
aattctttttcctctaaaagatttaattttggagctctttatctctgcgtggaattcatt
gctgcatgcagagatttaatcatgagaaccaatgaacatgctgagaagtttggtactgca
gatgagacatgttgctacatgcttcaaagctctgcgcctacactaatcactaccttagca
aaaagttctaatgatgttgttgatgatgcagatatttatttcaaagtgaagggtttacaa
atgttggttacattccctggatatttcttacaaacaccaacagctatgtttgagaatgtt
ctgaagactctcatgtcaatcatcttggtggattttgacaagtcgttgttatggaagcta
gcattgaaggctttagtgcacattggctcatttgtggatatggatcatgagtcagagaag
gcacaaatctatataagttttgttgttgaaaagactatttcattggtgtctcaagatgat
tttaatgtgcctttccctctaaaactggaagcagtatctgagattggtgcaagtaggcca
aatcatatgctaaaaattgtccaagggctggaagatgcaatagttgccaatttatccaaa
atttatgtccatggagatttgaagtcagctgaaaaaacaattcaactttttgaatgctac
tccaataagattatttcatggattgatgaaactggaggccttgaggaagttctgtatcga
ttcgtcattagtatttggaattgcgttgataggtgcaaagattctagcaatcaagtccaa
gacaaaggacttcttgatgcaacaatgatggcaatgaagcttgctgttgggagttgttca
gaggaaagtcaaaacattataatccaaaaggcctatggagctctttcatcgggcatatct
attccttttaaggactccatggatgacagttcttcagttaagcttgaaaacttgcacctc
tccgaacagctagacaagttttcacttagagatgaatggattctttcactatttgcatca
gtaatcatagcgatgcgtccaagaactcatattgcaaatgcaaaaggaatattgcattta
tttatgactgcccttgtcaaaggttgtactccagcagctcaggcattgggttctgtgatt
aacaaatttggtacaccatccaatgaagtagcaacttcaacaggctgtacgttggaagaa
gcaatggaaattatttttaggtcaaaactatggaatatcactgaggatggagttttaagg
ggatctggaacaagccacagcagtaaagtggggctcactgaattatgccttgggttttcg
agcaataaattgcttcaagtccatgccatcactggactagcatggatagggaaaggtttg
cttctaattggtcatgaacaagtaaaagatgttactaaaatcatcttggagtgcctattg
gcagatgacagaataggtgactctgagttgaggcaaggtctgctagaaaccagtcgcgag
ctgccttctgtgatgagaagtgcagcagatgcatttcatattcttatgagtgattctgat
gtttgtttgaaccgtaagtttcatgcaaaaatacgaccactctacaagcagcggtttttc
tctacagtgatgccaattttgcattccttgatagtgaaatctgattcatcattatctaga
tctatgctgtttcgggcatcagcgcacctcatctccaatgctccattaattgttatcttg
agtgatgccaagaagctcatgaaagtactgttggatggattgtccatactaagtgaagat
attctggataaagataagctttacagtcttttgctagttctatctgggatattgacagat
aaatgcggagaagaagctgtcctagagaatgcacatatattaattgattgtctcaccaga
ctaattgcctaccctcatatgatgcttgttcgagagacagcaattcaatgccttcttgcc
atgtctgagctgccccgtcctagaatctttcccctgaaaacacaggttctgcaagcaata
ttcaaggctcttgatgatccaaaaagagctgttcgtcaggaagctgttagatgtctacat
gcatggacatcgattgcataa

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