Rosa chinensis (China rose): 112189434
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Entry
112189434 CDS
T06020
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112189434
03036 Chromosome and associated proteins [BR:
rcn03036
]
112189434
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112189434
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112189434
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112189434
microRNA pathway
RISC loading complex
112189434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Phage_holin_T
Motif
Other DBs
NCBI-GeneID:
112189434
NCBI-ProteinID:
XP_024184538
LinkDB
All DBs
Position
2:complement(74289636..74299160)
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AA seq
890 aa
AA seq
DB search
MEDLPPPPPIVPPNVKPEVVALAPPKHSIMVRPRGSGTTGRRIQLSTNHFKVSVKNPDAV
FYQYSVLITYEDKRPVEGMGLGRKLVDKLYQTYSSEFAGKKFAYDGEKALYTVGPLPRNK
LEFTVVLEESFTKSNKIGKSGETDKRMKHCSNRSKTFNVEISYAAKITFKSIALALQGAE
VDNTQDALRVLDIILRQKAAKMGCLLVRQSFFHDDSRNFVEIGGGVTGVRGFHSSFRPTQ
GGMSLNMDVSTTMIVTPGPVIDFLLTNQGVREPRYIDWVKAKRMLKNMRITTRHRNMECK
ITGLSEKTCNNQLFNLKLRSGDGMSEGETVEITVYEYFVKHCGIELTYSQHMPCLDVGKP
KRPTYVPVELCSLVSLQRYTKALSSQQRASLVEKSRQKPLERIKSVTDALRNYRYDEDPV
LAECGISIEKQLIQMDGRILETPKLKVGGNEDMMPFKGRWNFKGKSFLDPTRINSWLAVN
FSGLCDLSQISRELINVGKKTGIHIERPKTLIEEDPRAERLGPVARVDKMFEQIQAKLQE
PPEFILCVIPKKGSDIYGPWKKKTLVDFGIPTQCISPPKLSDPYLTNVLMKINTKLGGIN
SLLALEYSSCVPLINDTPTMILGMDVSHGSPGRSDIPSVAAVVGSRSWPLISRYRAAVRT
QSPKVEMIDGLYKPLPNGNDDGIIRELLLDFYNTSKGRKPTQIIVFRDGVSESQFNQVLN
IELDQIVKAYQNLGEENVPKFTLIIAQKNHHTKLFQANSPDNVPPGTVVDTKIVHPRIYD
FYMCAQAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVYQRSCTAISIVAPICYAH
LAAAQVGQFMKFEDLSETSSAKGSVTTSESIPVPELPRLHRKVQGSMFFC
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttgcctccaccacctcctattgtaccaccgaatgtgaagccagaagttgtg
gctctggctcctcctaagcactctattatggttaggccacgtgggagtggaaccacaggg
cggcgcatacaattgagcactaaccacttcaaagtttctgtgaagaatccagacgctgtg
ttctaccagtactctgttctgataacttatgaagataagagacctgttgaaggcatggga
cttgggagaaagctggtggataagctctatcaaacatactcttcagagtttgctggtaaa
aagtttgcatacgatggggagaaagctttatacacagtcggtcctctcccgcgaaacaaa
cttgagttcacagttgttttggaggagtcatttacaaagagcaacaaaattgggaagtct
ggtgagactgataaaaggatgaagcactgttccaatcggtcgaaaacattcaacgtagag
ataagttatgctgccaaaataactttcaagtcaattgctcttgcccttcaaggagctgaa
gtagacaacactcaggatgcattgagagtgcttgatattattctacggcagaaagcagct
aagatgggatgccttctagtacgacagtcattcttccatgatgactccaggaactttgtt
gagattggaggaggtgtgactggtgtccggggttttcattccagtttccgtccaactcag
gggggcatgtccttgaatatggatgtatctacaacaatgattgtgacgcctggacctgtt
attgattttctgttaaccaaccagggtgtacgagaaccccgctacattgactgggtaaag
gccaaaagaatgctgaaaaatatgaggattacaacaagacaccgtaacatggagtgcaaa
atcactgggttgagtgagaagacctgcaataatcagttgtttaatctgaagctaaggagt
ggtgatggcatgagtgagggggaaactgtggagattacggtgtatgaatatttcgtcaaa
cactgtggcatagagctcacctattctcaacacatgccatgccttgatgttggcaagcca
aagaggcccacttatgttccagttgagctatgttcacttgtttcactacaaaggtataca
aaagcattatcttcccagcaaagagcctccttagtggaaaaatcaaggcagaagcctctg
gagagaataaagagtgtgactgatgctttaagaaattaccgctatgatgaggatcctgtg
cttgctgaatgtggtatatctatagagaagcaactgattcagatggatggccgtattctt
gagaccccaaagttaaaggtcggtggcaatgaggacatgatgccctttaagggacgatgg
aacttcaaaggaaagtcatttttggatcctactcgcattaactcttggctagctgtcaac
ttctccggactctgtgaccttagtcaaatctctcgggagcttatcaatgttgggaagaag
actggaattcatattgagcgacccaaaactctaattgaggaagatccgcgagctgaaaga
ctaggccctgttgctagagtagacaagatgtttgaacagattcaggctaagctccaagaa
ccacctgagttcattctgtgtgtcatacccaagaaaggttctgatatctatgggccttgg
aagaaaaaaactctggttgactttgggattccaacacaatgtatttccccacccaagctt
agcgatccttacctgactaatgtcctaatgaaaatcaataccaagcttggaggaataaat
tctctcttggcactggagtactcctcatgtgttcctcttataaatgatactcctacaatg
attttggggatggatgtgtctcatggttctcctggccgttcagatattccttcagttgct
gcggttgttggctctcgtagttggcctcttatatcaaggtacagagcagctgttagaaca
caatctcctaaggtggagatgattgatggtctatacaagccacttccaaatggtaatgat
gatggtattatcagggaactgcttctggacttctataacacaagcaaaggacgcaaacca
actcagataattgttttcagggatggcgtcagtgaatcacagtttaatcaagtgttgaac
attgagctggatcaaattgtaaaggcttaccagaaccttggggaggaaaatgttccaaag
ttcactctcattatagctcaaaagaatcatcacacaaagctattccaagctaatagccct
gacaatgttccaccagggacagttgttgacacaaaaatcgtgcacccaaggatctatgat
ttctacatgtgtgctcaggctggcatgattggaacttcgaggccagctcactatcatgtc
ttgcttgatgagattggtttttcccctgatgacttgcagaacctgattcactccctttct
tatgtgtaccaaaggagctgtactgcaatatccattgtggcacccatatgctatgcgcac
cttgctgcagcacaagtggggcagtttatgaagtttgaagatctctcggaaacttcatca
gctaaaggtagtgtcacaacatcagagagcatcccagttcccgagctccctaggcttcat
agaaaggtccagggctccatgttcttctgctaa
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