Rosa chinensis (China rose): 112189564
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Entry
112189564 CDS
T06020
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00906
Carotenoid biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M01040
Lutein biosynthesis, plants, lycopene => lutein
rcn_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112189564
Enzymes [BR:
rcn01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
112189564
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
HI0933_like
FAD_oxidored
Pyr_redox
NAD_binding_8
FAD_binding_2
Pyr_redox_3
FAD_binding_3
Trp_halogenase
GIDA
Motif
Other DBs
NCBI-GeneID:
112189564
NCBI-ProteinID:
XP_024184678
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All DBs
Position
2:38596089..38598239
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AA seq
497 aa
AA seq
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MDTLLKTHNKLEFLHPLHGFSEKVSNWNSSRQELRCGLRKSYRTGRVKASSSALLELVPE
TKKENLDFELPLYDQSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN
YGVWVDEFEAMDLLDCLDTTWSGAVVFIDEQSKKDLDRPYGRVNRKQLKSKMLQKCISNG
VKFHQAKVNNVIHEEEKSLLICNDGVTIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGI
LAEVEEHPFDVDKMVFMDWRDSHLKNSPELKERNSKIPTFLYAMPFSSNRIFLEETSLVA
RPGLPMKDIQERMVARLRHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHP
STGYMVARTLAAAPIVANAIVQYLGSDKSLSGNELSAEVWKDLWPIQRRRQREFFCFGMS
ILLKLDLNATRRFFNAFFDLEPRYWHGFLSSRLFLPDLVFFGLSLFSHASNASRLEIMGK
GTIPLVKMINNLIQDRD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatacattactcaaaacacataacaagctcgagtttctgcacccacttcatgggttt
tcagagaaagtgagtaattggaactcttcgaggcaggagcttcgatgtggtctccggaag
tcctatagaactggtcgtgttaaggctagtagtagtgctcttctggagcttgtgcctgaa
accaagaaggagaatctcgactttgagcttcccttgtatgaccaatcaaagggtcttgtg
gtggaccttgcagtcgtgggaggcggccctgcagggcttgcggtggcacagcaagtctcc
gaggcagggctatctgtttgctcgattgatccctctcccaagttaatctggcccaataat
tatggtgtttgggtggatgagtttgaggccatggatctgcttgattgcctcgacactacc
tggtctggtgctgttgtgttcatagatgagcaatcgaagaaggatcttgacaggccttat
gggagagttaataggaagcagctcaagtccaaaatgctgcagaaatgcatttcaaatggt
gtcaagtttcatcaagctaaagtcaataacgttattcacgaggaggaaaaatcgctcttg
atttgcaatgatggcgtcacaattcaagcttctgtggttcttgatgcaacaggtttttca
agatgccttgtacagtatgataagccttacaatccaggttaccaagtggcgtatggaatt
ttggcagaggtcgaagagcatccatttgatgtggataagatggttttcatggattggaga
gattcgcatttgaagaatagtcctgaactgaaagagagaaatagtaagatccctactttt
ctatatgcaatgcctttttcatccaacaggatatttcttgaagaaacctctctagttgct
cggcctggactacccatgaaagatatccaggaaaggatggttgctagattgaggcaccta
ggcataaaagttaagagcattgaagaggatgagcattgtgtcattccaatgggcgggccc
ctcccggtgctccctcaaagagttgttggaattggcggtacagctgggatggtgcaccct
tcaacagggtatatggttgcgaggactctggcagcagctcctattgttgcaaatgccata
gttcagtaccttggttctgataaaagtctttcaggaaatgaactttcagcagaagtttgg
aaagatttatggcccatacaaaggaggagacaaagggagttcttctgtttcggcatgtcc
attctgctcaagctggatttgaatgccacaagaaggtttttcaatgcattttttgatcta
gaacctcgttattggcatggattcttgtcatctcgactgtttcttcccgatcttgtattt
ttcgggctttcactgttttctcatgcttcaaatgctagtagattagaaataatgggaaag
ggaactattcccttggtaaagatgatcaacaacttgatacaggatagagattag
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