Rosa chinensis (China rose): 112189945
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Entry
112189945 CDS
T06020
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
112189945
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112189945
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112189945
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112189945
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112189945
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112189945
Ion channels [BR:
rcn04040
]
Chloride channels
Chloride channel (CLC)
112189945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112189945
NCBI-ProteinID:
XP_024185111
LinkDB
All DBs
Position
2:2166517..2170346
Genome browser
AA seq
777 aa
AA seq
DB search
MSSNGIHNGEDPESITAPLLSGRRFALNNHTSQVALVGANVSPIESLDYEILENEFFKQD
WRSRETVHVFQYIFMKWFTCFLVGIIVGMIGFCNNLAVENIAGVKFVITSNMMLEQRFWM
AFVVFFSYNLALTVFASTITSLVAPAAAGSGIPEVKAYLNGVDAPGIFSIRTLIVKIVGS
ITAVSSSLLIGKAGPMVHTGACVASLLGQGGSKKHGLTWKWLRYFKNDRDRRDLVTCGSA
AGIAASFRSPVGGLLFALEEMASWWRGALLWRAFFTTAVIAIVLRAWIDFCLSGKCGLFG
TGGLIMFDVYSSNMSYHLTDVPPVLLLAFVGGILGSFYNYLLTKVLRIYNLIHEKGIFYK
VLLACSISIFTSCLLFGLPWLASCRPCPPDASEACPTIGRSGNYKKFQCPPGHYNDLASL
IFNTNDDAIRNLFSKDTDTEFQYSSVLIFLISCFFLSIFSYGVVVPAGLFVPVIVTGASY
GRFVGMLVGSYTDLNHGLYAVLGAASLLGGTMRMTVSLCVIILELTNNLLLLPLIMIVLL
VSKTTADAFNGNIYNLIMKAKGLPYLKGHAEPYLRQLTVSDVVTGPLQLFNGIEKVGNIV
HVLRTTGHNGFPVIDESPPPEPPVLFGLVLRAHLIELLKKKSFVSTPVRTTTDAFRQFSS
EDFAKRGSGNGDKIEDIELTEEEMEMYIDLHPFTNASPYTVVETMSLAKALILFRQVGLR
HLLVIPKMSCRSPIVGILTRHDFMPEHIFRLHPTLVSSRWKRLRLRLPVREKSFRLS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaacggaatccacaacggcgaggacccggagtcaatcacggcgccgttactt
tccggccgccgattcgccctcaacaaccacacctctcaggtggccctcgtcggcgccaat
gtgtccccaatcgaaagcctcgactacgagattttggagaacgagttcttcaagcaggac
tggcgcagccgtgagaccgtgcacgtcttccagtacatcttcatgaagtggttcacctgt
ttcctcgtcggaattatcgtcggaatgatcggtttctgcaataacctcgccgtcgagaac
atcgccggcgtcaagttcgtcatcacctccaacatgatgctggagcagaggttttggatg
gcgtttgttgtcttcttctcttataacttggcgctcactgtgtttgcgtctactatcact
tctttagtggcgccggcggctgccggctccggcataccggaggtgaaggcttaccttaat
ggagtggacgctccggggatattttcaattcggactttgatcgtaaagatagttggcagt
attactgctgtgtcatcgtctcttttaattgggaaggcagggccgatggtgcatactggt
gcatgtgttgcatcattgttgggacagggtggatcaaagaagcatggtttgacatggaag
tggctacgatacttcaagaatgatcgagaccgtagggatcttgtgacttgtggatcagct
gctggaattgctgcctctttccgttcacctgttggtggtctgctctttgctcttgaagag
atggcatcttggtggcgaggagcccttttgtggagagcttttttcacaacagctgtaatt
gcgattgtgctccgagcttggattgatttttgcttgagtggaaaatgtgggctatttggt
accggaggcctgataatgtttgacgtatattcatcgaatatgtcttatcacctaacagat
gtgcctcctgtgctactcctggcatttgtaggtggcatattggggagcttctacaattat
ctattaacaaaagttctccgaatttacaatctcatccacgagaaaggcatcttttataaa
gttcttcttgcttgctcaatttccattttcacatcttgtcttctctttggattgccatgg
cttgcatcttgccgaccttgcccacctgatgcatcagaggcctgtcctacaattggaagg
tccggtaactacaagaagttccaatgtcctcctggtcactataatgaccttgccagcctc
atatttaacacaaatgatgatgccatcagaaatcttttcagcaaggacactgataccgag
tttcaatactcctcagttctcatatttttaatctcctgctttttcttaagtatctttagc
tatggggttgttgttcctgctggtttgtttgtacctgttattgtgactggtgcatcatat
ggccgctttgttggaatgttggtgggttcatacacagatctcaatcatggtctttatgct
gtgctgggggctgcttctttacttggtggaaccatgaggatgaccgtgtctttgtgtgta
attattctggagctgaccaataatctgttattgctaccattgataatgatagttcttctt
gtttccaagaccacagcagatgctttcaatggtaacatatacaatcttattatgaaagca
aagggtcttccatatttaaagggtcatgctgaaccatatctgaggcagctgacagtaagt
gacgtagtgactgggccacttcaactctttaatggcattgagaaagttggtaatatagta
catgttctcagaactacagggcataatggtttccctgtaattgatgagtctccaccacct
gaacctcctgttttgtttggtttggtcctccgtgcccatcttattgaattgttgaagaag
aaatcttttgtgtctactccagtgcggacgactactgatgccttcagacagttttcgtcg
gaggattttgcaaagaggggttcaggcaatggtgacaagatagaagacatagaactgact
gaggaggagatggaaatgtacatagacttgcatccatttactaacgcttcaccttatacc
gttgtggaaacaatgtcattagcaaaggctctcatacttttccgacaagttggtttgagg
caccttctagtgataccaaagatgtcctgtagatctcctatagtgggcatattgacaagg
cacgacttcatgccagaacatatattccgcttgcaccctacgctggtaagtagcaggtgg
aaaagattaagactccggctgcccgttcgagaaaaatcttttaggctatcttag
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