Rosa chinensis (China rose): 112190040
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Entry
112190040 CDS
T06020
Name
(RefSeq) chaperone protein ClpB3, chloroplastic isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112190040
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP100
112190040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_22
AAA_16
nSTAND3
NBD_SMAX1
AAA_18
AAA_14
TniB
AAA_7
Zeta_toxin
IstB_IS21
NACHT
AAA_25
AAA_24
Torsin
MSC3_beta
Motif
Other DBs
NCBI-GeneID:
112190040
NCBI-ProteinID:
XP_024185222
LinkDB
All DBs
Position
2:81126168..81132098
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AA seq
985 aa
AA seq
DB search
MTSSTTSFAASGVGLRLPQSVSTKCCSKASLFPRPTLSLTFHARPQFFRGLASRQFNPNG
AFGTGSGRLGRAPNPFVVRSEASSTGRGQITQQEFTEMAWQAVVSSPEVAKENKHQIVET
EHLMKALLEQKNGLARRIFAKAGVDNSRLLEATDKYIQRQPKVLGDSAGSMLGRDLEALL
QRARDYKKEYGDSFVSVEHLVLGFIQDQRFGKQIFKDFQISKQSLKSAIESIRGRQSVID
QDPEGKYESLEKYGKDLTAMAKEGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVG
KTAISEGLAQRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTESEG
QIVLFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALER
RFQQVYVDQPTVEDTISILRGLRERYELHHGVRISDGALVEAAILSDRYISGRFLPDKAI
DLVDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKERLNRLEAELSIL
KEKQSQLSEQWEHEKSVMTRIQSIKEEVDRVNLEIQQAEREYDLNRAAELKYGSLNSLQR
QLLGAEKELDEYIRSGKSMLREEVTGNDISEIVSKWTGIPVSKLLQSEREKLLHLEEELH
KRVVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKTLASYMFNTEE
ALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYSVILFDEIEKAHSDVF
NVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNGDDEVSPKELGYETIKQRVM
EAARSIFRPEFMNRVDEYIVFQPLDRDQINNIVKIQLQRVQKRIADRKMKIQVSEAAVQL
LGNLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKEEDIILVDTEVTAFANGQLPQQK
LVFKTVETGSESPAAENKEALSGAV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtcgaccacctcgttcgctgcttccggcgtcggccttcgtcttccccagtct
gtttccaccaagtgttgcagtaaagcttctctctttcctcgcccaactctctccctcacc
ttccacgccagaccccaattcttccggggactagcgtcccggcaattcaacccgaacggt
gcgtttgggaccgggtcgggccgactgggccgggctccgaacccgtttgttgtgcgctcc
gaggcttcttcaaccggaaggggacagattacacagcaggaattcactgaaatggcgtgg
caggcggtggtttcgtcgccggaagtggccaaggagaacaagcatcagatagtggagact
gagcatttgatgaaggcattgcttgagcagaagaatgggcttgctcgtcggattttcgct
aaggctggggtggataatagtaggcttcttgaggccactgataagtatattcagcgccaa
cctaaggttcttggtgactctgcgggatcgatgttaggacgtgatttggaagccttgctt
cagagagccagggattacaagaaggaatatggggactcgtttgtgtctgtggagcatttg
gttcttggtttcattcaagatcaacgatttgggaagcaaatatttaaggattttcaaatc
tccaagcagtctttgaagtcggctatagaatccataaggggacggcaatcagttattgac
caagatcctgaggggaaatatgagtcccttgaaaagtatggaaaagatctgacagccatg
gcaaaagaaggaaagcttgacccggtaataggaagagatgatgaaatacgcaggtgcatc
cagattctctcaagaagaacaaagaataacccagtgctgattggtgaaccaggtgttggg
aaaactgcgatttcagaagggcttgctcagcgaattgtgcaaggggatgtcccacaagct
ttaatgaatcgtaagctaatatctcttgacatgggtgcactaattgctggagcaaaatat
cggggagagtttgaggataggctgaaggctgtactcaaggaagtaacagaatcagagggc
cagattgtcctttttattgatgagatccacacagttgtcggggcaggtgctacaaatggt
gcaatggatgctggcaatcttttaaaacccatgcttggtcggggagagttgcggtgtata
ggtgcaacaacactggatgaatatcgcaaatatattgagaaagatccagcattggagcgt
cgttttcagcaagtttatgttgatcaacctactgttgaggatacaatttcgatactccgg
ggattgcgtgaaagatatgagttgcatcacggggtccgcatttctgatggtgcacttgtg
gaagctgcaattctctcagaccgttacatcagtgggagatttttacctgacaaagctatt
gacttagttgatgaagctgctgctaaattgaaaatggaaattacatcaaagcccacagcc
ctagatgagatcaatcgttcagtattgaaacttgaaatggaaagactgtcacttacaaat
gacactgacaaagcgtccaaagagagattgaaccgccttgaggcagagttgtccatctta
aaagagaaacaatctcagctgtctgagcagtgggaacatgagaagtctgtcatgactcgc
attcagtcaatcaaggaagaggttgacagggtaaatctggagatccagcaggctgaacga
gagtatgatcttaaccgtgctgctgagctgaagtatggaagtctgaattccttacagcgc
caactccttggtgctgaaaaggagctcgatgagtatatcaggtctgggaaatcaatgctg
agggaggaagttacgggaaatgacatttctgaaattgtcagcaagtggactggtattcct
gtttccaagcttctacagtcagagagggaaaagctcttgcatttggaggaagagctgcat
aaacgtgttgtaggacaggatcctgcagtgaaatcagtagctgaagctattcagcggtct
cgagcaggtctctcagatccacatcgcccgatcgctagtttcatgttcatgggccccacc
ggtgtagggaagacagaactagccaagacccttgcttcctacatgttcaacactgaagaa
gctcttgttagaattgatatgagtgagtacatggaaaagcatgctgtctcaagactgata
ggagctccacctggctatgtggggtatgaggagggaggacagctgacggaggttgttcgc
cggaggccatattcagttatcctatttgacgagattgaaaaggcgcattctgatgtgttc
aatgttttccttcaaattttagatgatgggagagtaactgactcacagggccgcactgtg
agtttcaccaacaccgtgatcattatgacctcaaatgttggttcacagtacatacttaat
ggagatgatgaagtatcgccaaaggagttaggttatgaaactataaagcagcgggtcatg
gaggctgcaaggtccatatttcgccctgagttcatgaatcgggttgatgagtacatagtt
ttccagcccttggaccgtgatcagataaacaacattgtcaagatacagttgcaacgagtc
caaaagagaattgcagaccgcaagatgaagatccaagtgagcgaggcagctgtgcagctt
cttggaaatctcggctacgatccaaactatggtgctaggccagtcaagcgagtgattcag
caatatgtggaaaatgagcttgccaagggcatcttgaggggagagtttaaagaagaagac
atcattttggtcgacacagaggtcacggcgtttgccaatggccagctaccccagcaaaag
ctagtcttcaagacggttgaaactggttcagaatctcctgcagcggagaacaaagaagct
ttgtcaggggccgtttaa
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