Rosa chinensis (China rose): 112190095
Help
Entry
112190095 CDS
T06020
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112190095
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112190095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Ig_DR_A0283-like
T26-6p_Ig-like_dom
Wzt_C
Motif
Other DBs
NCBI-GeneID:
112190095
NCBI-ProteinID:
XP_024185290
LinkDB
All DBs
Position
2:2984840..2987184
Genome browser
AA seq
676 aa
AA seq
DB search
MRNSGGWILGTLLFLGGFFFVHVAASSPRSHRQLAQDAVEIKMVKNGVVLDNKLVQLTFS
NPGGDVIGIRYAGIDNLLAINNKEGDRGYWDVVWNYPGEAKNTQYRLQGTQFKVITERPD
QVEVSFITTYNANSGVTAPVNVDRRYIMQQGRSGFYTYAIFERLEGWPGGDMETVRVAYK
LHQAKFRYMALSDTRQRFMPTADDRARGRPLAFKEAVLLNNETSSPGLEGEVDDKYQYSA
EDKDIKVHGWISIDDQSPPVGFWMITPSDEFRIGGPFKQDLTSHVGPTSLTVFAAHHYVG
KDVGLTFQEGEVWKKVFGPVFIYLNSAARNTADSPSTIRTLWNNAKDQMLEEVKSWPYNF
ISSPDFPSSDQRGSVSGQLLVHDRYIESLPRTSFAYVGLAAPGEVGSWQRESKGYQFWTQ
TDEKGYFLIENIRPGNYNLYASVPGIVGDYKYEVDITIEPGSKIQLASITYKPPRTGPTL
WEIGIPDRTAAEFYIPDPYPTLTNKLYKGSRLDKFRQYGLWARYYERYPNNDLIYRVGAN
NYTEDWFYAQVTRSVGNGRHVGTTWQIQFELKNVVNPGNYTLQLALASATYAELQVRVNN
LNAKPPLFSTGLIGDDNAIARLGIHGLYRLWSIDVPSTLLREGSNTIYLTQSRDGYSPFQ
GVMYDYIRLEGPSEKP
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattcaggtgggtggattctggggacgttattatttttgggtggttttttcttt
gttcatgttgcggcaagttcaccgagaagtcatcgacaactggcgcaagatgcggtcgag
atcaagatggtaaaaaatggagttgtgttggacaataagcttgttcaactgactttttct
aatcctggtggggatgttattggaataaggtatgcaggaattgacaacttacttgcaatt
aacaacaaggaaggtgatagagggtactgggatgtggtttggaattacccgggagaggcg
aaaaacacacaatacagactacaaggaacacaatttaaagtaatcacggagaggccagac
caagtagaagtttctttcatcaccacatacaatgccaactccggtgtgacagctccggtg
aatgttgacagaagatacataatgcagcaaggacgttccgggttctatacctatgccatc
ttcgagcgccttgaagggtggccaggaggggacatggagacagtaagagtggcttacaag
cttcatcaagccaagtttcgatatatggcgctatcggacactaggcaaaggttcatgcca
acagccgatgaccgagcacgtggtagaccacttgcattcaaagaagcggttctactgaac
aatgagacgagcagtcctggacttgaaggggaggtggatgataagtatcagtactcggcc
gaggacaaagatatcaaggtgcatggttggatttctattgatgaccaatctccaccggtg
ggattttggatgatcacacctagtgatgagtttcgtataggtggtcctttcaagcaggac
ctcacctctcacgttggaccaacttccctaactgtgtttgctgctcatcattatgttggt
aaagatgttgggctgacattccaagagggtgaggtatggaaaaaggttttcggacctgtc
tttatctatcttaactcggcagcacgaaacacagctgatagtccttcaacgatccgtaca
ctatggaacaatgccaaagatcaaatgcttgaagaagtcaaaagttggccatacaatttc
attagttctcccgactttccttcttcggatcaacgtggatcagtttcgggccagttacta
gtacatgatcgatacattgaaagtcttccaaggacaagttttgcttacgtaggattggct
gcacccggagaagttggatcatggcaaagggaaagcaagggataccaattttggactcaa
accgatgaaaaaggctatttcctcattgaaaatattagacccggtaactataatttgtat
gcatctgttccagggatagttggagactacaaatatgaggttgacattacaattgaacca
ggaagtaaaatccaattggctagtattacttacaaacctcctagaaccggtcctacattg
tgggaaattggcattcctgatcgcacagctgcagagttctacataccggatccatatcca
actctcacgaacaagttgtacaaggggagtcggttggacaagtttaggcagtacgggttg
tgggcacgttattatgagcgttaccctaacaatgacctcatctaccgtgttggtgctaac
aattacactgaggattggttttatgctcaagtgactagaagtgtaggaaatggccggcat
gtaggaactacatggcagatacagtttgaactcaagaatgtggtcaatcccggaaactac
acacttcaactggccttggcatcagccacttatgcagaattgcaagttcgggttaacaat
ttgaatgccaagccacctcttttttcgacagggctaataggcgacgacaatgctatagca
agacttggaattcatggcttatacaggttatggagtattgatgtaccaagcactctacta
cgcgaaggaagcaacaccatctatcttactcagtccagagatggctattcacctttccaa
ggagtcatgtatgattatataagactagaaggaccttctgagaaaccataa
DBGET
integrated database retrieval system
