Rosa chinensis (China rose): 112190117
Help
Entry
112190117 CDS
T06020
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112190117
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112190117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
112190117
NCBI-ProteinID:
XP_024185307
LinkDB
All DBs
Position
2:3017282..3019908
Genome browser
AA seq
707 aa
AA seq
DB search
MCSISTSMINIYAIGYLQIRKVVLKVRRSMRNSGGWILGTLLFLGGFFFVHAAASSPRSH
RLLAQDAVEIKMVKNGVVLDNKLVQLTFSNPGGDVIGISYGGIDNLLEINNKEGNRGYWD
VVWNDPGETENTQYRLQGTQFKVITERPDQVEVSFITTYNAKLQRGVTVPVNVDRRFIMQ
QGRSGFYTYAIFERLEGWPGGDMDTVRVAFKLQQAKFRYMALSDTRQRFMPTADDRARGR
PLAFKEAVLLNNETSNPEFEGEVDDKYQYSAEDKDIKVHGWISIDDQSPPVGFWMITPSA
EFRMGGPFKQDLTSHVGPTCLTGFASHHYVGKEVGLKFQEGEVWKKVFGPVFIYLNSAAR
NSANNPSTIRTLWNNAKDQMLEEVKSWPYNFISSPDFPSSDQRGSVSGQLLVHDRYNESL
PRTSLAYVGLAAPGEVGSWQRESKGYQFWTQTDEKGYFLIENIRPGNYNLYASVPGIVGE
YKYEVEITIEPGSKIQLASITYKPPRTGPTLWEIGIPDRTAAEFYIPDPYPTLMNKLYKG
SRLDKFRQYGLWSHYYDRYPNNDLIYRVGASNYREDWFYAQVTRSVGNGRYVGTTWQIQF
ELKNVVNPGNYTLQLALASATYAELQVRVNNLNAKPPLFSTGLIGSDNAIARVGIHGLYW
LWSIDVPSTLLREGSNTIYLTQSRDGNSPFHGVMYDYIRLEGPSEKP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctataagtacctctatgatcaacatctatgccatcgggtatttacaaatccga
aaagtagttttgaaagtgagaagatcgatgaggaattcaggtgggtggattctggggacg
ttattatttttgggtggttttttctttgttcatgctgcggcaagttcaccgagaagtcat
cgactactggcgcaagatgcggtcgagatcaagatggtaaaaaatggagttgtgttggat
aataagcttgttcaactaactttctctaatcctggtggggatgttattggaataagctat
ggaggaattgacaacttacttgaaattaacaacaaggaaggtaatagagggtactgggat
gtggtttggaatgacccgggagagacggaaaacacacaatacagactacaaggaacacaa
tttaaagtaatcacggagaggccagaccaagtagaagtttctttcatcaccacatacaat
gccaaactccagcggggtgtgacagttccggtgaatgttgacagaagattcataatgcag
caaggacgttccgggttctatacctatgccatcttcgagcgccttgaagggtggccagga
ggggacatggacacagttagagtggctttcaagcttcagcaagccaagtttcgatatatg
gcgctctcggacactaggcaaaggttcatgccaacagccgatgaccgagcacgcggtagg
ccacttgcattcaaagaagctgttctactgaacaatgagacgagcaatcctgaatttgaa
ggggaggtggatgataagtatcagtactcggccgaggacaaagatatcaaggtgcatggt
tggatttctattgatgaccaatcaccaccggtgggattttggatgatcacaccaagtgct
gagtttcgtatgggtggtcctttcaagcaggacctcacctctcacgttggaccaacttgc
ctaactgggtttgcttctcatcattatgttggtaaagaagttgggctgaaattccaagag
ggtgaggtatggaaaaaggttttcggacctgtctttatctatcttaactcggcagcacga
aactcagctaataatccttcaacgatccgtacactatggaacaatgccaaagatcaaatg
cttgaagaagtcaaaagttggccgtacaatttcattagttctccagactttccttcttcg
gatcaacgtggatcagtttcgggccagttactagtacatgatcgatacaatgaaagtctt
ccaaggacaagtttggcttacgtaggattggctgcacccggagaagttggatcatggcaa
agggaaagcaagggataccaattttggactcaaaccgatgaaaaaggctatttcctcatt
gaaaatattagacccggtaactataatttgtatgcatctgttccagggatagttggagag
tacaaatatgaggttgaaattacaattgaaccaggaagtaaaatccaattggctagtatt
acttacaaacctccgagaaccggtcctacattgtgggaaattggcattcctgatcgcaca
gctgcggagttctacattccggatccatatccaactctcatgaacaagttgtacaagggg
agtcggttggacaagtttaggcagtacgggttgtggtcacattattatgatcgttaccct
aacaatgacctcatctaccgtgttggtgctagcaattaccgtgaggattggttttatgct
caggtgactagaagtgtaggaaatggccggtatgtaggaactacgtggcagatacagttt
gaactcaagaatgtggtcaatcccggaaactatacacttcaactggccttggcatcagcc
acttatgcagaattgcaagttcgggttaacaatttgaatgccaagccacctcttttttcg
actgggctaataggcagcgacaatgctatagcaagagttggaattcatggcttatactgg
ttatggagtattgatgtaccaagcactctactacgcgaaggaagcaacaccatttatcta
actcagtccagagatggcaattcacctttccacggagtcatgtatgattatataagacta
gaaggaccttctgagaaaccataa
DBGET
integrated database retrieval system
