Rosa chinensis (China rose): 112190158
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Entry
112190158 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112190158
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112190158
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112190158
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GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112190158
NCBI-ProteinID:
XP_024185343
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Position
2:complement(6524395..6527391)
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AA seq
329 aa
AA seq
DB search
MEDSHTDGSVAISIGPDRNISEDGSSAARETRSTSPKWPTMEELVTLLEKTEDVKLHKPA
FLSMWDNRIFVISCAFAVLLDPLFSYIFLINDDKKCVMVDRKLKLAYVTLRSATDISYAL
DIIFCLWRIRNAKILEAWGMMSTVSLNGKRSVSPLLLVHIFVALPLPQVTLLTARGVDSV
LLLFTLIQYTVRVYRIYGSLGQQPNIATVKGSWLKATLDFFPFILAAHLFGAAWYYLAVD
RIVTCWMDAIGKYDPYCDDLKSSNTVENTKSLINKSCSKSSSNTIVDFGIYNSAIQSGLT
KSTKLSLKLLQGFWWGLRNLRFVHLYKHM
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcccatactgatggctcagttgcgataagcattggtccggatcgaaatatt
tctgaggacggcagttctgccgcaagagaaacaagaagtactagtccgaaatggccaaca
atggaggaacttgttaccctcttagaaaaaacggaggatgttaagcttcataagccagca
ttcctctcgatgtgggacaataggatatttgtaatatcatgtgcatttgccgtcttactt
gatcctttgttttcttacatctttctcatcaacgacgacaagaagtgtgtgatggtggac
cgaaagttgaagttagcatacgttactctacgatcagctacagatatatcatatgcattg
gacattatcttttgtttatggcgaattcggaatgctaagatacttgaggcctggggaatg
atgagtactgtttctttgaatggaaagagatcagtgtcaccccttctccttgttcatatt
tttgttgctcttccccttccacaggtaacactactcactgccagaggtgttgattctgtt
cttcttctttttactctaattcaatacacagtacgagtttatcgcatctatggttcgctc
gggcaacaacctaatatagcaactgtaaaaggaagttggcttaaagctacattggatttt
tttcccttcatccttgctgctcatctatttggagcagcgtggtactatcttgctgttgac
cgtatagtgacttgttggatggatgccattggaaaatatgatccttactgtgatgattta
aaatcttctaatactgtggaaaatacaaaatccctaattaataaatcatgctcaaaaagt
tcttcaaacacaatagtggattttggtatttacaattccgctattcaatctggtttgaca
aaatcaaccaagctttccctaaagttgttgcaaggtttttggtggggactgcgaaatctg
aggtttgtacacttatataagcatatgtaa
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