Rosa chinensis (China rose): 112190266
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Entry
112190266 CDS
T06020
Name
(RefSeq) COP9 signalosome complex subunit 5
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112190266
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112190266
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112190266
03036 Chromosome and associated proteins [BR:
rcn03036
]
112190266
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112190266
Peptidases and inhibitors [BR:
rcn01002
]
Metallo peptidases
Family M67
112190266
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112190266
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
112190266
BRISC complex
112190266
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
112190266
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
112190266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
112190266
NCBI-ProteinID:
XP_024185459
LinkDB
All DBs
Position
2:complement(53956747..53964115)
Genome browser
AA seq
432 aa
AA seq
DB search
MSLTCVTMSEDVWLTCMTHALSTETEEIMGLLLGDIENSANGGVTAVIWGASPQTRSDRR
KDRVETNPEQLAAASAQAERMTISSGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDINKVGRIQVIAFQSSDGKQHHMSRPISLSPVNKSSIIEVDSSLSTS
ENAPVRSGSTRAEAAEQDTADSRTSETIKAGGRSSELGHFFASAEANHQDRERTGGNYPT
ETSANNIVDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLYVLPTSSLIKLDSPLMSF
TELQRVLYEEERAAYNQAILQNMRDGKMHPLTFIHHTSMYQSSMCKLIEYCLSPAINALQ
CRLRENEFRLALLTDEVKGLENETRRGSESSSGSPRQVLSPTLRGSTPLGHRDLFSSRSV
TGPGSRSRKGSS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacgtgtgtgacaatgtcggaggacgtctggttaacttgtatgactcatgca
ttgtccacggagaccgaggagatcatgggcctccttcttggtgatattgagaattctgca
aatgggggtgtgactgccgtgatttggggagcgtcacctcaaactcgatcagaccggagg
aaggatcgtgttgaaactaatcctgagcagttggctgctgcatcagctcaagccgaaaga
atgacaatatcatctggaagaacaactagagtgattgggtggtaccattcacatcctcat
attacggttcttccttcccatgttgatgtacggactcaggcaatgtatcaacttctagat
tctgggttcatcgggctgatattttcctgtttcagtgaagatataaacaaggttggacga
atacaagtcattgcctttcagtcctcagatgggaagcagcatcacatgtcaagacctata
tctttatctccagtaaataaaagttcaattatagaagttgactcgtctttaagtacctca
gaaaatgcaccagtaagatctggctcgactagagcagaagctgctgaacaagacacagct
gattcaagaacttctgaaactataaaggctggcggaagatcttcagaacttgggcatttc
tttgctagtgctgaggcaaatcatcaagacagagaaagaaccggagggaactaccccaca
gaaacttcagccaacaatattgttgacatagatcccatggatatgtctgagagtatgcaa
gaagcaatgcaccgttcgaatttggatatgagtggtgctgagtatgtaagaaaagaagtt
cctctttatgttttaccgacctcgtctcttattaagcttgattcacctctaatgtcattt
acggaattgcaacgagtactgtatgaggaggagcgagcggcatataaccaagcaatcttg
caaaatatgagggacgggaaaatgcatccacttactttcatacatcacacatcaatgtat
caatcttccatgtgcaaattaatcgaatattgcttaagtcctgccataaatgcactgcag
tgtcggttaagagagaatgaatttcggttggcattgctcactgatgaagtgaagggtttg
gagaacgaaacacgtagaggaagcgagtcaagttctggatctcctcgtcaagttttgtcg
cctacactccgaggaagtactcctttaggccatagggacttgttcagttcaaggagtgta
acaggtcctggtagtcgaagcagaaaaggatcgtcatag
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