Rosa chinensis (China rose): 112190399
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Entry
112190399 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112190399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112190399
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112190399
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112190399
NCBI-ProteinID:
XP_024185597
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Position
2:84685242..84688806
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AA seq
707 aa
AA seq
DB search
MSRSITTPVKFRPLQNPSGDGSTSAAVVDEHSLHILWRHKILDPDSDLVSLWHHIFLVIC
IAALFIDPLYFYLPFVGGEGCLSTDHRLAVIVTFFRSIADLFYLLHMIVKFRTAFIAPSS
RVFGRGDLVMDGRQIAMRYLKSDFVVDLAATLPIPQIVIWLVIPATNNAGVDHANNTLAL
FVLIQYIPRLFLIFPLNQKIVKTTGVVAKTPWAGAAYNLLLFMLASHIFGAVWYLCAIGR
QFECWKTECSEENTKVVTCLYSFLDCKSLDLPERESWANATKVIKKCDASDKNADFKFGI
FDKAFKTEAAKTNFFEKYLFCFWWGLRNLCSYGQTLMTSTYLGETLFSIVLCISGLILFS
LLIGNMQTYLQSMSIKIEEWRIKQRDTDEWMRHRQLPEPLQERVRRFMQYKWFATRGVDE
ESILHSLPIDLCHEIQQHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLTIKGTYIVQEG
DPVNEMLFIIRGKLESSTTNGGRTGFFNSINLGPGDFCGEELLTWALMPSSSISMPSSTR
TVRALTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRFK
KRKMARDLAMQEGLYYLHVPGQEEEGYYYDNEEQTNLVNYDGESGDRSSTGEKLSTSMNL
GATFLASKFAANTRKGIVQKAQLVDPDSTSLQMPRMFKPDEPDFSVD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatccatcaccacgccggtcaaattccgccctctccagaaccctagcggcgac
ggctccacctcggccgccgtagtagacgagcactcgctccacattctatggcgccacaag
attctcgaccccgactcggacctggtatccctctggcaccacatcttcctcgtcatctgc
atcgctgcgctcttcatcgaccctctctacttctacctccccttcgtcggcggcgagggc
tgcctctccaccgaccaccgcctcgccgtcatcgtcaccttcttccgctccatcgccgac
ctcttctacctgttgcacatgatcgtcaagttccgcaccgcattcatcgcccccagctct
agggttttcggccgcggcgatctcgtcatggacggcagacagatcgccatgcggtatctc
aagtccgacttcgtggtcgatctggctgccactcttccaattccgcagattgttatctgg
ctggtgattccagcaacgaacaatgcgggcgttgatcatgccaacaacactctggccctt
ttcgtgcttattcaatatattcctagactatttctcatatttcctttgaatcagaaaatc
gtgaagactactggggttgtagccaagactccctgggcaggagctgcgtacaatttgctt
cttttcatgctagccagtcatatatttggagccgtttggtatctatgtgccatagggcgg
caatttgaatgttggaaaacggagtgtagtgaagagaatacaaaagttgtgacttgcctc
tatagtttcctggattgcaagagtttggacctaccagaacgggaatcttgggcaaacgcc
accaaagtgataaaaaagtgtgatgcctctgataaaaatgctgattttaagtttggaatc
tttgacaaagcatttaagactgaggctgcaaagacgaacttttttgagaagtacttgttt
tgtttctggtgggggttaagaaacttatgctcatacgggcagactttgatgacgagcaca
tatcttggcgagacattgttttccattgtcttgtgcatttctggtttgattctgttctca
ctattgattggcaacatgcagacttatctgcaatcaatgtcaataaaaatcgaagaatgg
agaattaagcaaagagatactgatgagtggatgaggcatcgccagttacctgaacccttg
caagaacgtgttcgtagatttatgcaatacaaatggtttgcaacacgaggagttgatgaa
gaatccatcttgcattcattacccatcgacctctgccatgaaatccagcagcacttatgc
ctttcccttgttcgccgtgtcccttttttctcacaaatggatgaccagcttcttgatgcc
atatgtgagcgtcttgtgtcatccttgactatcaaaggaacatatatagttcaagaaggc
gacccagtaaatgagatgctctttattatcagagggaaacttgagagctccacaaccaat
ggagggaggactggcttctttaactccatcaatctaggacctggtgacttctgtggtgag
gaactattgacatgggcattgatgccaagctctagcattagcatgccttcttccactcgg
actgtgagagccctcactgaagttgaagcttttgcgcttcgagctgaggaccttaagttt
gttgcaagtcagttcaaacgccttcacagcaagaaactacagcatgcctttaggtactat
tctcaccaatggaggacatggggtgcttgcttcatacaagctgcttggagaaggtttaag
aagaggaagatggcaagggacttggctatgcaggagggcttatactatttgcatgtaccc
ggccaagaggaagagggttactactacgacaacgaagaacaaacaaatcttgtaaactat
gacggtgagagtggtgataggtcatcgacaggggagaagttaagcacttccatgaatctt
ggggccacatttctggcttctaaatttgctgcaaatacaagaaaagggattgtgcagaaa
gctcagctggttgatcctgattcaactagtttgcagatgcctcggatgtttaagccagat
gagcctgatttttctgtagattga
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