Rosa chinensis (China rose): 112190440
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Entry
112190440 CDS
T06020
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04130
SNARE interactions in vesicular transport
rcn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112190440
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112190440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112190440
Membrane trafficking [BR:
rcn04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112190440
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SlyX
Motif
Other DBs
NCBI-GeneID:
112190440
NCBI-ProteinID:
XP_024185637
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All DBs
Position
2:complement(64225254..64228409)
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AA seq
218 aa
AA seq
DB search
MVKLTMIARVTDGLPLAEGLDDGRDIKDSEFYKQQVKALFKNLSRGQNEPSRMSVESGPY
IFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLRNEFERVNGAQIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSETRA
YADKARDLNRQALIRKWAPVAIVLGVVFLVFWVKTKLW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacgatgattgctcgtgttactgatggtcttccactagcagagggactg
gatgatggccgtgatattaaggattcggaattctacaaacaacaagtcaaggctctattc
aagaacttgtcaagaggccaaaatgagccttcaaggatgtcagtcgaaagtggaccttat
atattccattatatcattgaaggacgtgtctgttacttgacaatgtgtgaccgagcctat
ccaaagaaacttgcctttcagtatctcgaagatctcaggaatgaatttgagcgtgttaat
ggagcccagattgaaactgctgcaagaccatatgctttcattaaattcgatacattcata
cagaaaaccaagaaattgtaccaggacactcgtactcagcggaatatttcaaagttgaat
gatgaactctatgaagtccaccaaataatgactcgcaatgttcaggaagttcttggcgtc
ggtgaaaagttggaccaggtcagtcaaatgtccagtcgtttaacatcagagactcgtgcc
tatgctgataaggcgagagacttgaatcgacaggctctgatccgtaagtgggctcctgtt
gccattgttcttggagttgttttccttgttttctgggtcaaaacgaagctgtggtga
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