Rosa chinensis (China rose): 112190463
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Entry
112190463 CDS
T06020
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112190463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112190463
03036 Chromosome and associated proteins [BR:
rcn03036
]
112190463
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112190463
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
112190463
COMPASS/SET1 complex (yeast)
112190463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_SCAP
PQQ
Motif
Other DBs
NCBI-GeneID:
112190463
NCBI-ProteinID:
XP_024185659
LinkDB
All DBs
Position
2:complement(86132846..86136259)
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AA seq
342 aa
AA seq
DB search
MMKTSSMTELDDETVRSMAIGAVFSDFGGKINSLDFHRKEDLLVTASEDDSVRLYDIATA
KLLKTTYHKKHGADRICFTHHPSSVICSSRYNLDSTGESLRYLSMYDNRCLRYFKGHKER
IVSLCMSPINDSFMSGSLDHSVRIWDLRVNTCQGILHLRGRPTVAYDQQGLVFAVAMEGG
AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSSDGKSMLLTTTNNNIYVLDAYAGEKRC
GYSMEPSPNTSIEATFTPDGQYVLSGSGDGNLHAWSINRRNEVASWNSHIGVPSCLKWAP
RRAMFAAASTVLTFWIPNDSNADPTVMDTELTAGAESQHPSQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgtcatcgatgacggagctcgatgacgaaacggtgcgcagcatggccatc
ggcgccgtcttctcggacttcggtgggaagataaactcactcgattttcatcgaaaggaa
gatttacttgttactgccagtgaggatgactctgtgcgactctatgacattgcaactgcc
aagttgctaaagaccacatatcataagaaacatggagcagatcgcatatgctttactcat
cacccaagctctgtgatatgctcttcaagatacaacttggattctactggagaatcactg
cggtatttgtccatgtatgataatagatgccttcgctacttcaaagggcataaagagaga
attgtttccctctgtatgtctcctatcaacgatagcttcatgtctggttcattggatcac
agtgtccgaatatgggatcttcgtgtaaatacatgccagggaattttacatctacgtggt
agacctactgtggcctatgaccaacaaggtcttgttttcgctgtagctatggaagggggt
gctatcaagttgtttgattcacgctcctatgacaagggcccatttgatacgtttttagtt
ggtggagatacagctgaagtttgcgatatcaaatttagcagtgatggcaaatcaatgctc
ctgaccaccacgaacaataatatctatgttcttgatgcctatgcaggagagaagcgatgt
ggttacagcatggaaccatctccaaatacgagtatagaggcaacatttaccccagatggc
cagtatgtgttatcaggctctggagatggaaatttgcatgcttggagcattaacaggcgg
aatgaggtcgcaagctggaacagtcatattggagtcccatcatgtttgaagtgggctcct
cgcagagctatgtttgctgctgcgtcgactgttctcaccttttggataccaaatgattca
aacgctgatcccactgttatggacactgagcttactgccggtgctgaatcgcaacatcct
tctcaatga
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integrated database retrieval system
