Rosa chinensis (China rose): 112190531
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Entry
112190531 CDS
T06020
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112190531
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
112190531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
112190531
NCBI-ProteinID:
XP_024185731
LinkDB
All DBs
Position
2:complement(39580512..39586974)
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AA seq
292 aa
AA seq
DB search
MNGGPSGFHNAPVTRAFVIASALFTVFFGIQGRSTKLGLSYLDIFGKFRLWKLIVSVFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVTASLLFEILAIAFLKDPAVNLVTS
GPYGLIFASFVPFFFDIPVSTRFRVFGVHFSDKSFIYLAGLQLLLSSWKRSVLPGICGIL
CGSLYHLNVFCIRKAKFPEVIASFFSRLSLPTMGSLPAAPTRNIAGSVPSFTAQQVERNY
PSPMLSTTEPTEDSIATLVSMGFDRNSARQALVHARNDVTAATNILLEAQAH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcccatcgggtttccacaatgctcctgttaccagagccttcgttattgcc
agcgctctcttcaccgtattcttcgggatccagggccgttcaaccaagcttggattatcc
tatctggatatttttgggaagtttcgcctttggaagttaatcgtgtcagtttttgccttt
tcatctacaccagaactgatgtttggactgtatctgctctactacttcagggtctttgag
agacagataggttccaataagtattcggtctttatcttgttctccgtgacggcatcattg
ctttttgagatccttgcgatagcattccttaaagatcctgcagtaaacctagtgacatcg
ggaccttatggtcttatatttgcatcgtttgtaccctttttctttgacattccagtttca
acacgttttcgcgtgtttggcgtgcacttctcagacaagtcttttatatatctagcaggc
cttcagcttcttttatcatcttggaaaagatcagtcttaccagggatatgtggcatcctt
tgtggttccttatatcatctgaatgtcttctgtatccgcaaagcaaagttcccagaagtc
attgcatctttcttttcacgactttccttgccaactatggggagtctgccagcagcacca
accagaaatattgcgggaagtgtaccatcattcacagctcagcaagtggagagaaattat
ccctcgcccatgttgtctaccacagagccaacggaggactccattgctacccttgtttct
atgggttttgataggaactctgccagacaagcactagtgcatgccagaaatgatgtcact
gcggcgacaaacatcctgttagaagcacaggcccactga
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