Rosa chinensis (China rose): 112190543
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Entry
112190543 CDS
T06020
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112190543
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112190543
REST complex
112190543
Heterochromatin formation proteins
Other heterochromatin formation proteins
112190543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
MS_N
Motif
Other DBs
NCBI-GeneID:
112190543
NCBI-ProteinID:
XP_024185743
LinkDB
All DBs
Position
2:84027185..84036227
Genome browser
AA seq
1423 aa
AA seq
DB search
MKRIRDDVYGGAGSGGVGVAGAGGGGSSQLKRPVVASSRGDSNGPPQLQVPGGGRAVGEV
IATVGVATVGVGASQKLTTNDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTTGV
IARVKELFKGHTKLILGFNTFLPKGYEITLEEVEPKKTVEFEEAISFVNKIKKRFQNDEQ
VYKSFLDILNMYRKEHKDINEVYQEVASLFDDQPDLLDEFTRFLPDTSATTSTHQGQYGR
NAYPRFNERSSATPTLRPMPIDKQRRRDKITSHGDHDISVDRPELDDDKGMMKVLKEQKK
RFPEKENRDRRIRDHEDREVETDNNRDYNLQRFPEKRKSSRKVEGFGANANFAPYDDKDT
LKSKYSQAFGFCEKVKERLCSQDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYPDLM
DEFNDFLERCENIDGFLAGVMKKSLSSDGHLSRSVKVEDKDKEPKREMEGVKEKERYREK
YWAKSIQELDLSNCERCTPSYRLLPEDYPIPSASQRSELAAQVLNDHWVSVTSGSEDYSF
KHMRRNQYEESLFRCEDDRFELDMLLESVSSTSKRAEELLNSMNENKLSMETQIHIEDHF
TALNLRCIERLYGDHGLDVMDILRKSPTLALPVILTRLKQKQEEWTRCRADFNKVWADIY
AKNHYKSLDHRSFYFKQQDSKNLSSKYLVAEIKELKEKKQIEDDILLAVAAGNRQSIVPH
LEYEYLDISIHEDLYKLVEYSCDELSSTKEQLNKAMRLYTTFLEPMLGIPSRPHGSEDDE
DVGKARKGAMNCTASSNGESDGSPGGETTMVNFKQPKSGGNEDENALADVASSRNTLANG
DTLAKEDGSCDADNACRDDSMCNNIRVEKEVKEQKNISIPDKMHGSSKPVASIDRVGNSN
ASFAVGGENNHGRISLEVTSGSVATTLRPYDSISENEQSKKTNADPAVPSSEGGDIVKPA
SFGNGVFTESTKVNSRHEESVGPSKIEKEEGELSPVGDYGEDNFVVSGDAGVQALPKENH
GVERQYQSGNGEEICSQDAGENDADADDENSENVSEAGEDASGSETAGDECSREEHGEEE
DAEHDDVDGKAESEGEAEGMADGHLVGDGCSLQLPERFLMSVKPLAKHVSAPLVDEKKDS
RVFYGNDNFYVLYRLHQILYERILSAKSNSVGAETKWRTSKDGNPPDLYGRFMGALYNLL
DGSADNAKFEDECRAIIGNQSYILFTLDKLIYKFVKQLQTVATDEMDNKLLQLYEYEKSR
KKGKLIDSVYFENTRVLVHEENIYRLEFFSAPSRLSIQLMDSVSEKPEASAVSMEPNFSS
YLHNDFLSLYPGKKEPHGITLQRNKRKYAGQDESSAFSNAMEGVQLVNGLECKIACNSSK
ISYVLDTEDYFFRMRRKRRKSESRSPYCDQTRVQRFHKFLSVS
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatacgagacgatgtgtacggtggtgctggtagtggtggtgttggtgttgct
ggtgctggtggtggtggttcttctcaattgaaacggccggttgttgcttcttcgcgcggt
gactcaaatgggccaccccaactccaagtaccaggaggaggacgcgcggtaggtgaagta
atagctaccgttggagtagctactgttggagtaggtgcctctcagaaattgacgacgaat
gatgctcttacatacctcaaagaagtgaaggacatgtttcaagaccaaagagaaaagtat
gatatgtttcttgaggtcatgaaggatttcaaggctcaaagaactgacacgacaggtgtc
attgcaagagtaaaggaactgtttaaagggcataccaagttaattttggggtttaatacc
ttcttgccaaagggttatgagatcactcttgaggaagtggaaccaaaaaagactgttgag
ttcgaagaagctatcagttttgtaaacaagatcaagaaacgtttccaaaatgatgagcaa
gtatacaagtcattcttagacatactgaatatgtatcgaaaggagcacaaggacataaat
gaggtttaccaggaggttgcttctctatttgatgaccaaccagatttgctggatgagttc
accagatttttaccagatacgtcagcaacaacttcaactcatcaggggcaatatggccgc
aatgcatatccccgttttaatgagcggagctctgctacaccaactttgcggccaatgcct
attgacaagcaacgtaggcgggataagattacttctcatggtgatcatgatattagtgtt
gatcgtcctgagctagatgatgacaagggaatgatgaaagtactgaaggagcagaaaaag
cgttttcctgagaaggagaacagggataggagaattcgtgaccatgaagatagagaagta
gagactgataacaacagggactacaacttgcaacgttttccagagaaaaggaaatcttcc
aggaaggttgaaggttttggagcgaatgctaactttgctccttatgatgacaaagatacc
ttgaagagtaagtacagccaggcattcggtttctgtgagaaagttaaggagcgcttgtgc
agccaagatgactaccaggcatttttgaagtgccttcacatttatagcaatggcattatt
aaaaggaatgatttacaaaatttggtgactgatttattggggaagtatccagatcttatg
gacgaatttaatgatttcttggagcgctgtgagaatattgatgggttccttgctggtgta
atgaaaaaatctctgagtagtgatggtcatttatcgcgatcagtgaaggtagaggacaaa
gacaaggagccaaagcgtgaaatggagggagttaaagaaaaggaaagatacagggagaag
tattgggcgaaatctattcaagagcttgacctctctaactgtgaacgctgtactccaagc
tatcgccttcttccagaagattatccaataccctcagcaagccagagatcagaacttgct
gctcaggtcttgaatgaccattgggtatctgtgacttcaggaagtgaagattattctttt
aaacacatgcgcagaaatcaatatgaagaaagtcttttccgttgtgaagatgataggttt
gagctagatatgttgttggagtcagtaagctcaacttctaagcgagcagaggaactgttg
aacagcatgaatgaaaataaactcagtatggaaactcaaattcatatcgaagaccacttt
actgctctaaacttgaggtgcattgaacgtttatatggtgaccatggtcttgatgtgatg
gacatactgcggaaaagtccaacgctcgctctgccagtcatattaactcgcctgaaacag
aaacaagaggaatggacaaggtgtagagcggatttcaacaaggtttgggctgatatatat
gccaaaaaccattacaaatcacttgatcaccgaagcttttatttcaagcaacaagattca
aagaacttgagcagcaaatatttggtggctgagatcaaggaattgaaagagaaaaaacag
atagaggacgatattcttctggctgttgctgctggaaacaggcaatctatagttccacat
ctggagtatgaataccttgatatcagcattcatgaggacttgtataaacttgtcgaatat
tcatgtgacgagcttagctcaacaaaagaacagttaaataaggctatgagactttatact
acctttttggagccaatgttgggcattccttctcggcctcatggttcagaggatgatgaa
gatgtgggcaaagctaggaagggcgctatgaattgtactgcatcaagcaatggagaaagt
gatggaagtcccggtggtgagactaccatggtaaattttaagcagcctaaatctgggggt
aatgaagatgaaaatgctttagcagatgtggcaagttctaggaatactttggctaatggg
gataccttagccaaagaagatggcagttgcgatgcagataatgcctgcagggatgattca
atgtgtaataacattcgggtagagaaagaagtcaaagaacagaagaatattagtatccct
gataaaatgcatgggtcaagtaaaccggttgcctccattgatcgagtaggcaattccaat
gcatcatttgcagttggaggagaaaataaccatggaagaatcagcttggaagtgacatca
gggtctgttgcaactaccttaagaccctacgactccattagtgaaaatgagcaatcaaag
aaaactaatgctgatcctgctgttccttcatcagagggtggtgatattgtaaaacctgct
tcatttggtaatggggtgtttacggaaagcactaaagtcaacagtcgtcatgaagagtct
gttgggccctctaaaattgagaaggaagaaggtgaattatcaccggtcggtgattatggg
gaggataacttcgttgtctctggagacgctggggtgcaggctttgcctaaggaaaaccat
ggtgttgaaagacaatatcaatctggaaacggggaagaaatttgctctcaggatgctggg
gaaaatgatgcagatgctgatgatgaaaacagtgaaaatgtttctgaggctggtgaagat
gcctctggcagtgagacagctggtgatgagtgttcccgagaagagcatggagaggaggag
gatgctgaacatgatgacgttgatggtaaggctgagagtgaaggtgaggcggaagggatg
gctgatgggcaccttgttggagatggctgttccttgcaattgccagaacgttttcttatg
tctgtgaagcctcttgcaaagcatgtatcggcacctttagttgacgaaaagaaagactct
cgtgttttttatggaaatgataacttctatgtgctctataggcttcatcaaattttatac
gaaaggattttatctgcaaaatcaaattcagtaggagcagaaactaagtggagaacttcc
aaggatggcaaccctccagatctttatggcaggtttatgggtgcactgtacaatttgctt
gatggatctgctgataatgcaaaatttgaggatgagtgccgagctattattggaaatcag
tcgtacatcttattcacgttggacaagttaatatataaatttgttaaacagcttcaaacg
gttgcaactgatgagatggacaataagcttcttcagttatatgaatatgaaaagtctcgg
aaaaaagggaagctaattgattctgtctattttgaaaacacacgtgtccttgttcacgag
gagaacatttacagattggaattcttctctgcaccctcccggctgtccatccagctgatg
gacagcgtgagtgaaaagcctgaggcgtcggcagtttctatggaacctaatttttcatct
tatctgcacaatgatttcctgtcactttatcctggcaaaaaggagccacatggaattacc
ctgcagagaaacaagcgcaaatatgcagggcaagatgaatcctcggcgttttccaatgcc
atggagggtgttcaattagtcaatgggttggagtgtaaaattgcttgcaactcatccaag
atctcttatgttctcgacacagaagattacttcttccgtatgagaaggaaaaggagaaag
tcagagtccagatcaccatattgtgatcagacgagggtacagcggttccacaaattcttg
tccgtctcataa
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