KEGG   Rosa chinensis (China rose): 112190616
Entry
112190616         CDS       T06020                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112190616
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    112190616
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 DEAD zf-RING_5 zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 ResIII zf-ANAPC11 zf-RING_4 zf-P11 zf-Di19 RING_ZNF598
Other DBs
NCBI-GeneID: 112190616
NCBI-ProteinID: XP_024185831
LinkDB
Position
2:complement(86851348..86857972)
AA seq 1012 aa
MGNKITDELLSTVRSIVDSGYSDMDIIRALHMANNDVTAAINIIFDTPTPKSKERSDFAS
SPKISSPEVANSKPNGGDCPASSGDDVVGDVESSAGSEWWLVGCGEVAGLSTCRGRRIKP
RDEVDFTFPLKISPSPGKVFGRGRPPAACSEIVRFSTTDSGEIGRIPKEWARCLLPLVRD
KKVKIEGHCKSAPDVLSIMDTILLSISVHINSSMFLKQKQTSLKTASNSTEETVVHPLPT
LFQLLGLTPFQKAEFTPGDLYTRKRPLDQKDSSGLCASIIHANISKNPSRNEDEVENEEC
ISDAEVDNIVGVGDSSELEEMDPPAALLCELRPYQKQALHWMIQLEKGKCMDEAAMTLHP
CWEAYHLADKRDRIIYLNAFSGDATTEFPSALQMARGGILADAMGLGKTIMTIALLVAHS
GHGSSGSQPVSRSSSEDIEASDMSEYSSKLPKAVTKFSGFHKLMKQKKTLAYGGSLIVCP
MTLLGQWKAEIESHVQPGSVSVYVHYGQSRPRDATLLAQSDVVITTYGVLASEFSTENSK
DNGGLYSVSWFRVVLDEAHTIKSSKSQISIAAAALVAGRRWCLTGTPIQNNLEDIYSLLR
FLRVEPWANWAWWNKLIQKPFEEGDERGLRLVQSILKTIMLRRTKFSTDREGRPILVLPP
ADIQVVYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPF
LVMSRGDTQEFSDLNKLARHFLKGSQNSVEGEAKDVPSRAYVQEVVEEMRKGEQGECPIC
LEAFEDAVLTTCAHRLCRECLLASWRNSTSGLCPVCRKSLSKQDLITAPTDSRFHVDIEK
NWVESSKIVILLRELECLRSSGSKSIVFSQWTAFLDLLQIPLSRSNIPFLRLDGTLNQQQ
REKVLKQFSEDSDILVLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQ
TKSVMIKRFIVKGTVEERMEAVQARKQRLISGALTDQEVRSARIEELKMLFT
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgggcaacaaaatcaccgacgaactattatccaccgttcgttcaatcgtcgattccggc
tactccgacatggacataatccgagccctacacatggccaacaacgacgtcaccgccgcg
atcaacatcatcttcgacacccccacacccaaatctaaagaaaggtcagatttcgcgagc
agtcccaaaatctcgagtcctgaagtcgcgaattcgaagccgaacggcggcgattgcccc
gccagttcgggcgatgatgtagtaggtgacgtggagagttcggccggcagcgagtggtgg
ttggtgggttgcggcgaggtggcggggttatcgacgtgtagagggaggaggatcaagccc
cgagacgaagtggatttcacatttcctttgaagatttcgccgtctcccggcaaggttttc
gggaggggacggccgccggcggcgtgttcggagattgtgaggttctccacgacggattcc
ggagagattggacgaatacccaaggaatgggctcggtgtctgttgccacttgtgagagat
aagaaggttaaaatcgaggggcattgtaaatctgctcctgatgtcttgagcattatggac
accattctcttgtctataagtgtgcatatcaatagttctatgttccttaagcaaaagcag
acctcacttaagacggccagtaattccacagaggaaacagtggttcatcctctcccgaca
ttgtttcagttgctaggcctaactcctttccagaaggcggaatttactcctggtgacttg
tacacgagaaagcgccctttagaccaaaaggacagttctgggctttgtgcctcaattata
catgcaaatatttctaaaaatccttctagaaatgaagatgaagttgaaaatgaggaatgt
atttcagatgctgaggttgataacattgttggggttggagatagctctgagttagaggaa
atggatcctcctgctgcacttctgtgtgaacttcgtccgtatcaaaagcaggctcttcat
tggatgattcaacttgaaaagggaaaatgcatggatgaggcagcaatgactcttcaccct
tgttgggaggcatatcatcttgcagacaagagggaccgtattatatatttgaacgcattt
tctggtgacgcaacaacagaatttccaagcgcacttcaaatggccagaggaggaatccta
gctgatgctatgggcctgggaaagacgattatgacaatagcactccttgttgctcattca
ggacatggatcatcaggtagtcaacctgtgagccggtcctccagtgaagatattgaagcc
agtgacatgtcagaatattcatcaaaactcccaaaggcggtcacaaagttttcaggattt
cataagttgatgaagcaaaaaaaaacgcttgcatatgggggcagtttgattgtatgtcct
atgacccttcttggccagtggaaggcagagattgaatctcatgtgcaacctggatctgta
tcagtatatgttcattatggacaaagtagaccaagggatgcgactcttttagcccaaagc
gatgttgtgatcactacatatggcgttttagcatcagaattttctacagagaattctaag
gacaatgggggactttactcagttagttggtttagagtggttcttgatgaagcgcacacc
ataaaatcctctaaaagccaaatctctattgctgctgctgctttagttgctggtcgccga
tggtgtcttactggcacccctatacagaacaatctggaggacatttatagtctactccgg
tttttgagggtagaaccttgggcgaattgggcttggtggaataaactcatccagaaaccc
tttgaggagggtgatgagagagggttaaggctggttcaatctatcttaaagacgataatg
ttaaggagaaccaagtttagcactgatcgtgaaggcaggcctattttagtccttcctcct
gctgatattcaggtggtttactgtgaactcacagaagctgaaaaagacttttatgaggcc
ttgtttaaaagatcaaaggtgaaatttgatcaatttgttgagcaaggacgggttcttcat
aattatgcatccatattggaattacttttacgccttcgccaatgttgtgatcacccattt
cttgtgatgagtcgaggtgatacacaagaattttcagatctgaataagcttgcaagacat
tttctaaaaggcagccagaattctgtggaaggggaagccaaagatgtgccttcacgggct
tatgttcaggaagttgttgaagaaatgcgcaagggggaacagggagagtgtcccatatgt
cttgaagcatttgaagatgcagtattgacaacttgtgctcatcgcttatgccgagaatgt
ctcttggcaagttggcggaattcaacttctggcttatgtccagtttgcaggaagagtcta
agtaagcaagatcttattacagcaccaactgacagtcggttccatgttgatattgagaaa
aactgggtggaatcatccaaaatagttattcttttgcgtgaacttgaatgtcttcgttcg
tcaggctcaaagagcattgtcttcagccagtggacggcctttctggacctcctgcagata
cctctttctcggagtaacattccatttttgcgcctggatgggactctgaatcaacagcag
cgcgaaaaagtgttaaaacagttttcagaagacagtgacattctggtgttgctaatgtca
ctgaaggccggaggagttggaataaatttgacagcagcatccaatgcctttgtcttggat
ccatggtggaatccagctgtagaggaacaagcggtcatgcgtattcatcgcatcggacaa
acaaaaagtgtgatgatcaaacgatttatcgtgaagggaacagtcgaggaaagaatggaa
gcagtgcaagctcgtaaacagcggttaatttctggcgccttgactgaccaagaagttcgt
tcggctcgcatagaagaactaaagatgctttttacttga

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