Rosa chinensis (China rose): 112190680
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Entry
112190680 CDS
T06020
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112190680
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112190680
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
112190680
NCBI-ProteinID:
XP_024185918
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Position
2:complement(280978..282844)
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AA seq
394 aa
AA seq
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MSVVITCLIALPSLFESSHAAGGATYNVVSYGARGDGKTDSTKAFLRAWSSACSSARSAT
VYVPCGTFLLKPVVFSGPCRSSRIVFQMGAGTSTTLVAPSNYWELGNSGNWILFIKVTGL
SIYGGTVDARGAGFWRCRRYGKSCTAGARSVSIFWCRNVVVSWLRSLNSQIMHMAIDNSN
NVLVKNVWIRAPSGSPNTDGIHVEASTGITIIASTIMTGDDCISIGSGARNLWIERIACG
PGHGISIGSLGGYVNEDGVQNVTVTSSVFTKTQNGVRIKSWARASNAFVRNIVYRNLIMK
NVDNPIIIDQKYCPGNQGCPRQSSGVKISRVTYKNIRGTSGTQVAMNFYCSPSNPCWGVK
LQDIRLTYLNRAATSSCANIGGSKSGVVIPRSCF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgttataacttgtttgatagccttgccttcgctgtttgaatcatcacatgca
gctggcggtgcaacttacaatgtggtgagctacggtgcgagaggagatgggaaaacagac
tcaaccaaagcattcctcagggcatggtcctcggcatgctcctccgctagaagcgctact
gtttatgttccttgcggcaccttcttgttgaaacctgtagttttcagcgggccatgcaga
agtagcagaattgtgtttcagatgggagcaggaaccagtactactctagttgccccttcc
aattactgggaacttgggaactccggaaattggattttgttcataaaggtcacaggcctc
tctatctatgggggcacagttgatgctcgaggtgctggattttggcgttgccggagatat
ggcaagagttgcacagcgggagccaggtcagtatcgatattttggtgtcgtaatgtggtg
gtgagctggttgaggtccttgaacagccaaattatgcatatggcaattgacaatagcaac
aatgtgctcgttaaaaacgtgtggatcagagccccaagcggtagtcctaacacagacggc
atacacgtagaagcttcgactgggattaccattattgccagcaccataatgaccggagat
gattgcatatcaattggctccggcgcaaggaacttgtggattgaacgcattgcctgtggc
cctggacatggaataagcattggtagtcttggtggttatgtgaatgaagatggtgtgcaa
aacgtgacggtaacaagttccgtcttcacgaaaacgcaaaacggtgtgcggatcaagtca
tgggccagagctagcaatgctttcgtaagaaacattgtttaccgcaatcttatcatgaaa
aatgtcgacaacccaatcatcatcgatcagaaatattgccctggtaaccaaggttgtcct
cgtcagagctctggcgttaagattagcagagtgacatacaagaacataaggggcacatca
ggcacacaagtagccatgaacttctactgcagccctagtaatccgtgctggggggtcaag
ctgcaagatataaggctcacttatttgaatagggcagccacttcctcttgtgccaatatc
ggtgggagcaaaagcggagtagtcataccaaggagttgtttctga
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