Rosa chinensis (China rose): 112190719
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Entry
112190719 CDS
T06020
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112190719
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112190719
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
112190719
NCBI-ProteinID:
XP_024185963
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Position
2:306227..308438
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AA seq
390 aa
AA seq
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MANHKWQTIFLFIFINSAMAKAVTYSVTTLGAKPDGKTDSTKAFLSAWAKACASVKPAVI
YVPAGRFLLRNALFSGPCKNSLITFRIAGTLVAPSDYRVIGNAGNWLLFRQVNGVTISGG
ILDGQGTGLWACKNSGKSCPTGSTTLSFSNSNNIVVSGLVSLNSQKFHIVINGCNNVKMQ
GVKVSASGNSPNTDGIHVQMSSGVTILNSKISTGDDCVSIGPGTSNLWIENVACGPGHGI
SIGSLGKDLQEAGVQNVTVKTVTFTNTQNGVRIKSWGRASTGFARNILFQHAIMINVQNP
ILIDQQYCPDKKGCPGQVSGVKISDVTYQDIHGTSATEVAVKFDCSSKYPCSRIRLENVK
LIYKNNRGALASCSNAGGTSAGTVQPTSCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccacaaatggcaaaccatattcctatttattttcatcaactccgccatggcc
aaggcagtcacttacagcgtgaccaccttaggagccaaaccagatggcaagaccgactca
actaaggccttcctttctgcatgggctaaagcttgtgcctcggtgaaacccgctgtgatt
tacgtgccggcagggaggttcttgctccgcaatgccctgttcagcggaccatgcaagaac
agcctcatcaccttccgcattgctggcaccctcgttgctccgtccgattaccgggtcatt
ggaaatgccggtaactggctcctctttcggcaagtcaacggtgttaccatttccggtgga
attcttgacggtcaaggcactggtttgtgggcgtgcaagaactccggcaagagttgcccc
accggatccacgacattgagtttttccaactccaacaatattgtggtaagtggattggta
tctctaaacagccaaaagtttcacatagtcatcaacggttgcaacaatgttaaaatgcaa
ggggttaaagtatcagcctccggcaacagccctaacaccgacggtatccatgttcaaatg
tcgtcgggtgttaccattctcaactcaaagatctctaccggtgatgattgtgtatcaatt
ggtcctggcacttctaacttgtggattgaaaatgttgcatgcggaccgggtcacggaatt
agcattgggagtctaggcaaagacctacaggaagctggtgtgcaaaatgtaacggtcaaa
acagtgacatttaccaatactcaaaatggtgtgaggatcaagtcctgggggagggctagc
actggatttgccaggaacattcttttccaacatgctatcatgattaacgttcaaaatcca
atactcatcgatcaacaatattgtcccgacaagaaaggctgccctggccaggtttctgga
gttaaaatcagtgatgtgacatatcaagacattcatggtacatcggcaacagaagttgca
gtgaaatttgattgtagttcaaagtacccatgtagcagaatcagattagagaatgtgaag
ctcatttacaagaataaccgaggagctctagcttcatgtagcaatgctggtggaacatct
gcgggtacggtgcagcctacaagttgtctatag
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