Rosa chinensis (China rose): 112190746
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Entry
112190746 CDS
T06020
Name
(RefSeq) auxin response factor 7 isoform X1
KO
K14486
auxin response factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112190746
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
112190746
NCBI-ProteinID:
XP_024185994
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All DBs
Position
2:8472964..8478549
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AA seq
1163 aa
AA seq
DB search
MKAPTNGFLATSVEGEQKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFIPNYPNLPSKLICLLHNVTLHADTETDEVYAQMTLQPVNKYDKEAILASDMGLKQSR
QPSEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELVARDLHDSAWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDAVLFIRDEKSQLLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHATANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTITGISELDPVRWKSSQWRNLQVGWDESTAGDRPSRVSIWEIEPVVTP
FYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWLGDEFGMKNSPSSIFPGLSLVQWM
NMQQNNQFSAPQSGFFPSMVPPTTLHNGTDDPSKLLNFQAPGLTAPGQLNKAAPQNQVSQ
VQQPTVAWPQQQQLQQLMQNPMNQQQQNHSQQQQLQQLLHTPLNQQQQNHPQQQQLQQLM
QTPANQQLQNYSQQQQQQREQQNHQEPQGLQQLQQLHQLHQQQPQRQQSQQQQQLGQLTL
VSNGLVTPNQIPSQNSHQPMMFTQLQQQHSLTSSTQSQQAVHTPNKNSFQSAAGTQDSQI
QQQLEPQPSLLLRQQQAQLQQSPLQLLQQPQKAQQQPQVQSSSQQALSEQQLHLHLLQKQ
QQQQQQQQQQQQQQQQQLFSPSSPLLQPQMLQQQLAHQQNQQLQQLQLPLSQHHQQQLSG
NSFSADKLLSSNNFSASPMMQAQHVSSIQQQNQHKPVTAIRSHSNLTEGDGPSCSTSPST
NNCQVSSSNLLNRNQQGTAMLIGDPVAEPSSNLVHDFQSKSDIRIKHELPISKGLDQIKY
KGTITDQLEASSSGTSYCLDASTIQQNYALPSFCLDGDVQSHPRNNLPFSANVDGLAPDT
LMSRGYDSQKDLQNLLSNYGGTPRDIETELSTAAISSQSFGAPNMPFKPGCSSDVALNDA
GVLNNGLWGSQAQRLRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQ
RTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSVEVQQMSLDGDLGNVPVPNQAC
SGTDSGNAWRAPYEDNSAASFNR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcctacaaatgggtttttggcaacttcagttgaaggagaacagaagaatatc
aattcagagttatggcatgcctgtgctgggccattggtttctttgcctccagttggaagt
cttgtggtttatttccctcaaggccatagtgagcaagttgcagcatctatgcaaaaggag
acggatttcatacctaattaccccaatcttccttcgaaattgatatgcttgcttcacaat
gtcacattacatgctgataccgaaacagatgaggtgtatgcgcagatgactctccaacca
gtaaacaaatatgacaaggaagcaatactggcgtctgacatgggcctcaagcaaagcagg
caaccttctgagtttttctgcaaaactcttacagctagtgacacaagtactcacggtgga
ttttctgtacctcgtcgtgcagctgagaagatcttcccacctctagattttacaatgcaa
ccaccagcgcaggagcttgtagcaagagatttgcatgatagtgcatggacattcagacat
atttatcgcggccagccaaaaaggcacctgctgactactggttggagtgttttcgttagc
acaaaaaggctctttgctggagatgctgttctttttataagagatgaaaaatctcagctt
ctcttgggtataaggcgtgctaataggcagcaaccagctctctcttcatcagtcatttcc
agcgatagcatgcatattggaattcttgcagctgcagctcatgctactgcaaataacagt
ccatttaccatattttacaacccgagggccagcccttctgagtttgtggtacctttagcc
aagtacaataaagcgatgtatacccaagtttcacttggcatgcgattcagaatgatgttt
gagactgaagagtcaggagttcgcagatacatgggtacaatcactggcattagcgagttg
gatcctgttcgttggaaaagttctcaatggcgcaatcttcaggttggatgggatgaatca
actgctggtgatcggcctagccgagtttcaatttgggaaattgagcctgttgtaactcct
ttctacatctgcccacctccattctttagaccaaagtttcccaaacaaccagggatgcca
gatgatgaatctgacatagagaatgctttcaagagagccatgccatggcttggagatgag
tttggcatgaaaaattccccaagctcgattttccctggtttgagtttagtgcagtggatg
aatatgcaacaaaataatcagttttcagcccctcagtctggatttttcccatccatggtt
cctccaactaccctgcataacggtactgatgatccatccaagttgctgaattttcaagct
cctggtctaactgcaccgggccagttaaataaagcagctccacaaaatcaagttagtcaa
gtgcaacagccaactgtggcatggccccaacagcagcagctgcagcaactaatgcagaat
cctatgaaccaacagcagcaaaatcactcgcaacagcaacagctacaacaattattgcat
actcctttgaaccaacagcagcaaaatcatccccaacagcagcagctgcagcaattaatg
cagactcctgcgaaccaacagctgcaaaattactctcagcagcaacagcagcaacgggag
caacaaaaccatcaagaacctcaaggccttcaacagctgcagcaacttcatcagctacat
cagcagcaaccacaacggcaacagtcacagcaacaacaacagttaggtcaactgactctt
gtaagtaatggtcttgttactccaaaccaaatcccaagccaaaattcacatcaaccaatg
atgttcactcagcttcagcaacagcattcactaacaagcagtacccaatcccagcaagca
gtccacactcctaataagaattcattccagtcggcagctggcacacaagactcacaaatt
cagcaacaattggaaccgcaaccaagcctgttgctaaggcagcagcaggcacagttgcaa
cagtccccattgcagttgttgcaacagccgcagaaagcacagcagcagccacaagtacaa
tcatcgtcacaacaggctttgtctgagcaacaacttcacttacacttgcttcagaaacag
cagcagcaacagcaacagcaacagcaacagcagcagcagcagcaacaacaattattctct
ccatcaagcccacttttgcagccgcaaatgctacagcagcagctggcccatcaacaaaac
cagcaattacaacagttgcagttgcctctgtctcagcatcatcagcaacagctaagcggt
aacagcttctcagcagacaaacttctcagcagcaacaacttctcggcttcaccaatgatg
caggcccaacatgtttcatctatccaacaacagaaccagcacaagccagttacagcaatc
agaagccattccaatcttacagagggggacggtccatcatgttcaacctccccttctaca
aataattgccaggtgtcctcatcaaacctactgaacaggaatcagcaaggaacagccatg
ttgataggggatccagtggcggagccttctagtaacttggttcatgattttcagagcaag
tctgatattcgaatcaaacatgagttgcccatttcaaaaggactggaccaaattaaatat
aaaggtaccatcactgatcagttggaagcttcctcttctggaacttcatattgtctggat
gctagcacaatacagcagaactacgcactcccatccttctgtttagatggtgatgtccaa
tcacatcctcggaacaatcttccgttttcagctaatgttgatggattggcacctgacact
ttgatgtcaagaggatatgactctcagaaagatcttcagaacttactgtctaattatggt
gggacaccaagagatattgagacagagctatctactgctgcaatcagctctcaatcattt
ggggcgccaaacatgccattcaagcctgggtgctctagtgatgttgctctaaatgatgct
ggagttctaaataatggtttgtggggatcacaggcccaacgtttgagaacgtatacaaag
gttcaaaagcgtggatcagtgggaagatgtattgatgttacccggtataaaggctatgat
gagctcaggcatgatctagcccgcatgtttgggattgaagggcaactagaagatccacaa
agaactgactggaagcttgtttatgtggatcacgaaaatgacatacttcttgttggtgat
gatccatgggaggagtttgtgagctgtgtccagagtataaagatactgtcatctgttgaa
gtacaacaaatgagcttggatggagatctgggaaatgttcctgttcccaaccaagcttgc
agtggaactgacagtggaaatgcatggagggcaccatatgaagataactcggcagcctca
ttcaatcggtaa
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