Rosa chinensis (China rose): 112190851
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Entry
112190851 CDS
T06020
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112190851
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112190851
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
112190851
NCBI-ProteinID:
XP_024186120
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Position
2:67452931..67454415
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AA seq
397 aa
AA seq
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MAIINHFCSCLLLIFLLFMISLFGLSNAAATYNVMKYGAKADGKTDSTQAFVKTWAAACS
SAQTATMYVPKGSFLLKAAVFRGPCKSRIIVQIYGTLIAPTDYWALGNSGHWILFIKVNR
LEVLGGRLDAKGAGFWACRKSGKSCPVGARSITFNWANDVVISGLSSVNSQLTHLVINSC
NNVAVRNVTLYAPDDSPNTDGIHVQGSTGVTITGATLMTGDDCVSIGPGTKNLYMSNIRC
GPGHGVSIGSLGRAVNEAGVQNVTLTNAVFTGSDNGVRIKSWARPSTGFVTNILFQNIMM
RNVENPIIINQNYCPHNQGCPNQSSGVKISQVTYKNIQGTSATAEAVTFDCSPSNPCRGI
RLHDIKLTYLNKVATSSCNNIGGTSTGVVMPRSCLRS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctatcatcaatcacttctgctcatgcctactacttatctttctcttgttcatgata
tccttgttcgggttatcgaatgcagccgcaacttataatgtgatgaaatatggtgcaaaa
gcagatgggaaaacagactcaacccaagcatttgtcaagacatgggcagcagcatgcagc
tctgctcagacagccaccatgtacgtccccaaaggaagtttcttgctgaaagctgcagtg
ttcagaggcccttgcaagagtagaattatcgttcagatatacggaaccctgattgcccct
actgattattgggctttgggaaactccggtcactggatcttgttcattaaggtcaataga
cttgaagttttaggtggtagactcgacgccaagggagctggcttttgggcttgcaggaaa
tcaggaaagagctgccctgttggagctaggtcgataacgttcaattgggcaaatgacgtt
gtgataagtggtttatcatccgtcaacagtcagttaactcatcttgtgatcaacagctgc
aacaatgtggctgtccgaaacgttacgctgtatgctccggatgacagccccaacactgac
ggcattcatgtgcagggctcaactggggttactatcactggtgcaaccttgatgaccgga
gacgattgtgtatcaattggtcctggaaccaaaaacctgtacatgagtaacatcaggtgc
ggcccaggacatggcgtaagcattggtagtctaggcagggcagtgaacgaagctggggtc
caaaatgtgacgttgacgaatgcagttttcaccggatcggacaatggagtacgaataaag
tcatgggcgaggcccagcactgggtttgtgaccaacattctcttccagaacatcatgatg
aggaacgttgagaaccccatcatcatcaatcagaactattgcccacataaccaaggttgc
cctaaccagagttctggtgtgaagattagtcaagtaacatataagaatatacaagggacg
tcggcaacggcggaggcggtgacatttgactgcagcccaagtaatccgtgcagagggatt
agattgcatgacatcaagcttacatacctaaataaggtagccacatcttcatgcaataac
attggtggaaccagcaccggagtagtcatgcccaggagttgcttgagaagttga
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