Rosa chinensis (China rose): 112191348
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Entry
112191348 CDS
T06020
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X4
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00906
Carotenoid biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112191348
Enzymes [BR:
rcn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
112191348
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
HI0933_like
GDI
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
112191348
NCBI-ProteinID:
XP_024186430
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Position
3:23222895..23228961
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AA seq
628 aa
AA seq
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MHFPHLLSFTSTPAMHLSQFPSHHSQSSGHVQSPHLGKTRPRSQQPPISTLGCYNVKDYL
QTQTPKRKLNQGSGLRYSNSKNRSFAVRSSSTLSVDKVLESDGKAGGKSKYDAIVIGSGI
GGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQ
ALAAVGCEMQVIPDPTTVHYHLPDNLSVRVHREYSEFISELTAKFPHEKNGILKFFGECW
KVFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARRYIQDPQLLSFID
AECFIVSTVKALQTPMINASMVMCDRHYGGINYPVGGVGGIAKSLAKGLVQLGSEILYKA
NVTGIILDQGRAVGVRLSDKREFFAKTIISNATRWDTFGKLLKEEDLPKEEENFQKLYVK
APSFLSIHMGVKYDVLPPDTDCHHFVLEDDWARLEEPYGSIFLSIPTILDPSLCPEGRHI
LHIFTTSSIEDWEGLSRKDYEAKKERVADEIISRLEKKLFPGLMSSIVFKEVGTPKTHRR
YLAREQGTYGPLPRRTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVSFSGVMCAHRV
AADIGLEKKSPVLDAALLGLLGWFRTLA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcactttccccacttgctaagcttcacttccacacctgccatgcacctttctcagttt
cccagtcaccacagccagtcatctggccatgttcagagtccccacttgggtaaaaccaga
cccagaagtcaacaacctccgatttccactttaggatgttacaatgttaaagactacttg
cagactcaaacacccaaaaggaaattgaatcaaggaagtgggttgagatattcgaattcg
aaaaataggagctttgcagtgaggtccagttcaacattgagcgtagataaagtgttggag
agtgatggaaaggcaggtgggaagagtaaatatgatgctattgttatagggtcagggatt
ggagggttggttgcagctacacagttggctgtgaagggtgccaaggttttggttttggag
aagtatgtgattcctggtgggagttctgggtactatgagagggatggttatactttcgat
gttgggtcttctgtcatgttcggtttcagcgataagggcaatctaaacttgataacacaa
gcattggcagcagtgggttgtgagatgcaggtgatacctgatccaactactgtccattat
catctaccggataatctttctgttcgagtacacagagaatacagtgaatttatttcagaa
cttactgctaaatttccccatgaaaagaatgggatcctaaaattcttcggtgaatgttgg
aaggttttcaatgccttgaactctttggaactgaagtcacttgaagagcctatctatctt
tttggacagttctttcagaagcctcttgaatgcttgacactagcctattatttgcctcaa
aatgctggggacatagctcgtaggtacattcaggatccccaactgttgtctttcattgat
gcggagtgttttattgtgagcacggtcaaggctttgcagacaccgatgatcaatgcgagc
atggtgatgtgtgacaggcattatggtggaattaactaccctgttggtggcgttggggga
attgcaaagtccttggcgaaaggtctggtgcagctgggcagtgagatactttacaaggcc
aatgttactggcatcatacttgatcagggtagagctgttggagtaaggctttcagacaag
agggaattttttgccaaaaccataatatcaaatgctacaagatgggatacctttggaaag
ctgttaaaagaagaagaccttccaaaagaagaggaaaactttcagaaactttatgttaag
gcaccatcttttctttccatacacatgggggtgaaatatgatgttctgccaccagataca
gattgccaccattttgtgcttgaggatgattgggcaaggttagaggagccatacggaagt
atatttttaagcattccaactattcttgatccatcgttatgcccagaagggcggcatatt
cttcacatatttacaacctcttccattgaggactgggagggactctctcgaaaggactat
gaagcaaagaaggagcgtgtggcagatgaaatcattagcagattagagaaaaaactattt
ccagggctcatgtcatctatcgtttttaaggaggtgggaacgccaaagacacacaggcgg
tacctggctcgtgaacagggtacttatggaccattaccacgcagaactcctaagggctta
ttgggaatgccattcaacacaacagccatagatggtctttactgtgttggtgatagctgc
tttccgggacaaggtgttatagctgtatccttctcaggagtaatgtgtgctcatcgtgta
gctgctgatataggtcttgagaagaagtctccagtactggatgctgcccttcttggacta
cttgggtggtttaggacattagcatga
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