Rosa chinensis (China rose): 112191438
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Entry
112191438 CDS
T06020
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112191438
Enzymes [BR:
rcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
112191438
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112191438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
112191438
NCBI-ProteinID:
XP_024186555
LinkDB
All DBs
Position
3:complement(33419480..33423519)
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AA seq
471 aa
AA seq
DB search
MENRCKFWLPKKKRLCANVPLTESVFCGNHTPRSDSQWIPCPIDPSHSVLEENLEGHLRR
CPLLKQVESLTHQPFYQKGINAGKEEDQQEIETASSTRLEDSALADDPKSEAFGYILSEM
KRTVYSMSVPDFYKLIEKIESVHKSICKDIQESYKVPEACGMWIKREVDRKLPFQEKHVM
QQVSILGNMEDVGLIKSSIAKERADCDDSNGFPVRDDCDYSNGVPAVVEFGAGRGYLTQM
LADCYGIKRVFLVERKSYKLKADRSLRQKESLILQRLRIDIEDLNLNAVESLREGTFISI
GKHLCGPATDLTLRCCLGEQSNQSNGGGCVNPNLRGLAIATCCHHLCQWKHYINKKYLLE
LGITKEEFHVIIWFTSWAVDADHGTDLPDVTDYRSSIGKKQSHGDNGVEDVVRNMKAVER
AALGFMCKQIIDTGRLMWMKEHGLEAQFVKYVPSSVSPENHLLIARSTILS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccgctgcaagttttggctccctaaaaagaagagattatgtgccaatgttccc
ctcactgaatcagtgttctgtggcaaccacacacccaggtccgacagccagtggattcca
tgcccaatagacccttctcactctgtgcttgaagaaaatcttgaaggacatcttaggaga
tgcccattgctcaaacaagtggagtctctgactcaccagcccttttaccaaaagggtatc
aatgctggcaaagaagaagaccaacaagaaatagaaacagccagtagtactagattggag
gattcggcattggctgatgaccccaagtcggaggctttcggttacattctttcagagatg
aagaggactgtttatagtatgtctgtgcctgatttctataaattaatcgaaaaaattgag
tctgttcataagtccatatgcaaggatattcaggagtcgtataaggtaccggaagcttgc
ggaatgtggatcaaaagagaggtagacagaaaattgccatttcaagagaaacatgttatg
cagcaggtgtcgattcttggaaacatggaagacgttgggttaataaagagttccatagca
aaggagagggctgactgtgatgatagcaatggtttccctgtgagggatgactgtgattat
agcaatggtgtccctgcggtggttgagtttggagcggggagaggatacttgacacaaatg
ctggcagattgttatggcattaaaagggtctttttggttgaaaggaagtcatacaagctg
aaggctgatcgatccttgcgacagaaagagagcttgatactgcaacgtttgagaattgac
attgaggatttaaacctgaatgccgttgagtcattgcgggaaggtactttcatttctatc
ggtaaacatctttgtgggcctgcaacagatttgactctgagatgttgccttggggaacaa
tccaatcaaagtaatggtggagggtgtgttaacccgaacctaagaggtctagctattgcc
acatgttgccatcatctttgccagtggaagcactacataaataagaagtatctattagag
ttggggatcacaaaagaggaattccatgtcattatatggttcactagttgggcagtggat
gctgatcatggcacagatcttcctgacgttactgattacagatcttccatcggaaagaag
caatcccatggagataatggagttgaagacgttgtgagaaatatgaaagcagttgaaagg
gctgcgttagggttcatgtgcaagcagattatagacacgggtaggttaatgtggatgaag
gaacatggattggaagcgcagtttgtcaaatacgtaccatctagtgtctcccctgaaaac
cacttactaattgctagaagcaccattctttcttga
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