KEGG   Rosa chinensis (China rose): 112191554
Entry
112191554         CDS       T06020                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03022  Basal transcription factors
rcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112191554
  09124 Replication and repair
   03420 Nucleotide excision repair
    112191554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112191554
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112191554
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     112191554
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     112191554
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 112191554
NCBI-ProteinID: XP_024186684
LinkDB
Position
3:5032651..5036850
AA seq 329 aa
MADFQTSTHRSKWIFTPEQLAEKYKAANQQAIETLEKYGVALAKVNDDGSLTYPEIAKEN
ADKHSRPKAVTIEEEQLMRVFYETKLQEVCNNFHFPHKVQATALIYFKRFYLRWSVMQHE
PKNIILTCIYAACKIEESHVSAEELGKGISQDHQMILNNELIVYQSLEFDLIVYAPYRSV
QGFIHDMEESCGLEDDQLPMLQTLRDTAKMDVDKIMLTDAPLLFPPGQLALAALRSANQV
HKVVDFDRYLESMLSRKSSAHTISELVESLNAIDSWVRRYKFPSDKEILHINRKLKSCWG
QSSRDESKKRDKKSKHKSKRGSNEAQNVT
NT seq 990 nt   +upstreamnt  +downstreamnt
atggccgatttccagacctcgactcaccgaagcaagtggatcttcacgcccgaacagctg
gcggaaaaatacaaggctgcgaatcagcaagcaatagaaacattggagaagtatggagta
gcactagcgaaggtaaatgatgacgggtcattaacgtaccccgaaattgccaaagagaat
gctgacaagcattctcgtccaaaagcggttaccattgaagaggagcaattgatgagagta
ttttatgaaactaaacttcaagaagtgtgtaacaactttcatttccctcataaagttcag
gcaacagctctcatatattttaaaaggttttatctaagatggtcagttatgcaacatgaa
ccaaaaaatataatattaacctgtatatatgcggcttgtaagatagaagaaagccatgta
tcagcagaggagcttggtaaggggatctcacaggatcatcaaatgatactcaataatgag
ttgatagtttatcagagtttggaatttgatctcattgtctatgcaccatatcgctcagtt
caaggttttatccatgatatggaggaatcctgcggattagaggatgaccagcttccaatg
cttcagactttgcgggacactgcaaagatggatgttgataaaatcatgctcacagatgca
ccacttctattccctcctggacagttggccttggctgcgctgcgtagtgcaaatcaggtg
cacaaagttgttgactttgacagatacttggagagcatgctctctcgtaagagttctgca
cataccatttcagagctagttgaatcccttaatgcaattgattcttgggtaaggagatac
aaatttccttctgacaaggaaatcctgcacatcaatcggaaactgaaatcttgttggggt
caaagttcgcgtgacgaaagcaagaagcgggataagaaatcgaagcacaagtccaagagg
ggttcaaatgaagcacaaaatgtaacttaa

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