Rosa chinensis (China rose): 112191595
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Entry
112191595 CDS
T06020
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112191595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112191595
Enzymes [BR:
rcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112191595
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112191595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2635
Motif
Other DBs
NCBI-GeneID:
112191595
NCBI-ProteinID:
XP_024186731
LinkDB
All DBs
Position
3:complement(27047014..27061025)
Genome browser
AA seq
1678 aa
AA seq
DB search
MASAQTLEVATESVTAVTFSFFTDEEARNQSVVKITKPDLVDELGTPVQGGLYDPAMGPL
DDRGNAPCKTCGQSAFNCRGHFGHIDIDLPVYNPLLFNVLYKLLQRTCLSCHHFRTSREL
VEKCVSQMELVMKGDVVAAKRLDSDSPDEYSYLGEDGEGSDIERDRHSKPERWTSLQFTE
AMSILDRSLEKQQKCKNCKFKNPKITKPTFGWFQMSGAGNARENVIRGCKLVGPLTVQEE
GESCGDDVDAGISDISCASSLVTQDTATKKSKGQETVVPSEFFKQKKALSGDLLPTQVKE
IMRLLWTNEAQLCSFLSDIQCQGVERKEGHSMFFLETVLVPPIKFRPPAHSGDSVMEHPQ
TVSLSKVVLTNTYLKDALGKNKHSQTILRWRQLQDCINLMFDSKTVAGQGKSDASGICQV
LEKKEGMFRQKMMGKRVNNACRSVISPDPYLAVNEIGIPPIFALTLTYPERVTPWNVFKL
RNAIVNGSEIHPGATHYIDKTSIKLPQKRRERLLLSRKLPSSKGAGTQHGKGSDYENKIV
LRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHF
PQDEISRAEAYNMVNANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRSDEFNQLLY
SSSVSACGSDSFSGKPGQMVLTSNSEDAMQPLLPAIWKPVRLWTGKQVITTLLNHITSGS
PPLTVEKEAKLPSGFFNCKNLEEEEKSDKGRRKKEKKPRKEEAGKDDSKEKEDPDESKLL
IYRNNLVRGVIDKNQFGDYGLVHNVQELYGSEAAGKLLSVFSRLYTVYLQMHGFTCGVDD
LLLIQSKDKKMKEQLESCEELGEKVFREFIGVGQDEKKDPVILQSDIEEFLRSNGESVTE
MLDRKMTSELNKKISKSDVFKQLFQKGLSKPSVKNYMYLMTSSGAKGGVANLQQIASYLG
QQELEGKRVPQMVSGKTLPCFPPWDWSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVD
TAVKTSRSGYLQRCLIKNLECLKVSYDHTVRDADGSIIQFRYGEDGIDVHLTSFIKKFEK
LANNKEMFDKKFGRQIDKFNPYIDELPPALKRKAEMSVPNLSLKEKNANLKLMEHKYLSS
LAQPGEPVGILAAQSVGEPSTQMTLNTFHNAGRSEMNVTLGIPRLQEILMTASNDIKTPV
MTCPLIKEKAGDAKSLADRLKRITVADIIESMKVTITPFTDQYHQTCRTYELEMTLFIPE
YLLKFSEDWEELLEVKFVRALEDAIQNHLVLLSKISGIKDVKADSLPKASNETDEDVSYN
ISQHGVEDDDDGGADDSEHGEGAEDFGLDAQKRKRQGTDEMEYEDDCEDEVNEGHQSDGF
ESEIDKVESDIESDKDGVTRISDANDEMPESPSAGDTSKPRSKGKKTKSRDKIKKKTRAK
LVRKEYDRATFVSVKGFHFEIHFKFTNEPHILLDQIARKTARNVYVKSSGNILDCKDIDI
YGNEDQVFCSWNDPRNKLPGEKNPTEEEKKMRALQTAGLDFATLWKLQDDLDVNYIYSNN
IHAMLNTYGVEAARETIIKEISNVFKVYGISVNIRHLSLIADYMTHSGGYRPMNRFGGIA
ESVSPINKMSFETASKFIREAAYHGETDDLETPSARICLGLPVKVGTGCFDLMQKMEI
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagctcaaaccttagaggttgctacggagtcggtgacggcagttacgttcagc
ttctttacagatgaagaggcgcgaaatcagagcgttgtgaagattacgaagccggatttg
gttgacgaattaggaacgccggtgcaaggcgggctttacgatcccgcaatgggccctctt
gacgacagaggcaacgcaccttgcaaaacatgtggtcagagtgcgtttaattgccggggt
cattttggccatattgacatcgatttgcccgtttataatcccttgttgttcaatgttctt
tacaaacttctacaaagaacctgcttatcctgtcaccattttcgaacaagccgagagctg
gttgaaaaatgtgtttcccaaatggaactcgtgatgaaaggtgatgttgttgcggcaaaa
agattagactctgactcacctgatgaatactcatatcttggagaggacggggaaggaagt
gatattgagagagacaggcattcgaagccagaaagatggacatctcttcagttcacagag
gcaatgtctattttggatcgttctctggagaaacaacaaaaatgcaagaattgtaaattt
aagaatcctaaaatcactaaacctacttttggttggtttcagatgagtggtgctggcaat
gctagagaaaatgtgatcagaggatgcaagctggtaggacctttaactgttcaagaagag
ggtgaatcttgtggtgacgatgttgatgcaggcatatctgatatatcttgtgcatcctct
cttgtgactcaagatactgcaacgaagaagagtaaaggacaagagaccgtagtgcccagt
gagttctttaagcagaaaaaagccttatcgggagatcttttaccaacccaggttaaagaa
ataatgaggcttttgtggacaaatgaggctcaactctgctcttttcttagtgatatccaa
tgccaaggagttgaaagaaaagaaggtcactctatgtttttcttagagactgttcttgta
ccaccaatcaaatttcgtcctccagcccatagtggtgattctgtgatggagcatcctcag
actgtttcattaagtaaggtggttctgacaaatacttacttgaaagacgctcttggtaag
aacaaacactcacagacaattctgcgttggaggcaactgcaagattgtataaatctaatg
ttcgatagcaaaactgttgcgggtcaaggtaaatcagatgcttctggaatatgtcaggtg
ctggagaaaaaggaaggcatgttccgtcagaaaatgatgggaaagagggttaataatgcg
tgccggtctgttatatccccagatccctatttagctgttaatgagattggaattcctccg
atctttgcattgacattaacatatcctgagagagttactccgtggaatgttttcaagttg
aggaatgctattgtcaatggttctgaaatccatcctggagctacgcactatattgataaa
acatctattaagttgcctcaaaagcggagggagcgcttgttattgtcaagaaagttacct
tcttcaaaaggggcagggacacaacatgggaagggatctgactatgaaaacaaaattgta
ctccgtcacttgcaagatggggacattgttcttgttaatcgccagcctacacttcacaaa
cccagtataatggctcatatagttcgtgtattgaagggggagaaaacattacgcatgcac
tatgcaaattgcagtacatacaatgctgattttgatggtgatgaaatgaatgttcatttc
ccacaagatgaaatttctcgcgctgaagcttacaatatggtgaacgcaaataatcaatac
gtaaagcccactagtggtgatcccattcgagccttgattcaggaccatgttataagtgct
gtcctcctcacaaaaaaggacacctttctccgctcagatgaatttaatcagcttctttat
agttcttctgtttcagcatgtggttcagactctttctctggcaagccaggtcaaatggtt
ctaacgtctaactctgaagacgcaatgcagccccttcttcctgcaatttggaaaccagtg
cgtctgtggactggaaagcaggtcatcactacgttgctaaaccatattacaagtggttct
ccaccacttactgttgaaaaggaagcaaaactcccatctgggtttttcaactgtaagaat
cttgaagaagaagagaaatctgataaaggtcgacgaaagaaagagaagaagccaagaaaa
gaagaggctggtaaagatgattcaaaggaaaaagaggatccagatgagagcaagctgtta
atctatagaaacaacttggtccgtggcgtgattgacaagaaccagtttggtgattatggt
ttggtccataacgtgcaggaactctatggttcggaagctgcaggaaaattgctttctgtt
tttagtcgtttatatactgtttatttacagatgcatgggttcacttgtggagttgacgat
cttttgctaatacaaagcaaagacaaaaaaatgaaggaacaacttgaaagttgtgaagag
cttggtgaaaaagttttccgtgagtttattggggtcggacaagatgaaaaaaaagatccg
gtgatactgcagtcggatattgaagaatttttacgcagtaatggagaatctgtgacggaa
atgttggacaggaaaatgacaagtgaacttaataagaaaatctccaaatctgatgtcttc
aaacaattgtttcagaaagggttatcaaagccatctgttaagaattatatgtatcttatg
acaagctctggggctaaaggaggtgtggcaaatctccaacaaattgcttcatacttgggt
cagcaagagctagaagggaaacgagtcccacaaatggtttctggaaagacattaccatgc
ttccctccttgggattggtcacctcgagctggaggttttattattgatcgctttcttacc
ggtcttcatcctcaggagtattattttcactgcatggctggccgtgaagggttggttgat
acagctgtcaaaacatctcgtagtggatacttgcaaagatgcctcataaaaaatctcgaa
tgcctcaaggtttcttatgaccataccgtccgtgatgctgatggttcaattattcaattc
cgatatggagaggatggtattgatgtccatttgacaagctttattaaaaaatttgaaaaa
ctggcaaataataaagaaatgtttgacaagaaatttggtcgtcaaattgacaaattcaat
ccctatattgatgagttgcctcccgctctcaaaagaaaagcagaaatgtcagttcctaat
ttgtctttgaaggagaaaaatgccaacttgaagttaatggagcacaaatatctcagcagt
cttgcgcaaccaggagaaccagttggtattcttgctgctcagtctgtaggagaaccatca
acacagatgactttgaataccttccataatgctgggcgaagtgaaatgaatgtgactctt
ggaattccacggctccaagagatcttgatgactgcttcaaatgatatcaagactccagtt
atgacatgtccattgataaaggagaaagcgggggatgctaaaagtctagctgataggttg
aagaggatcactgtggcagacataatagagagcatgaaagtaactattacaccattcaca
gatcagtatcatcagacttgccgtacttatgaactggagatgacactttttataccagaa
tatcttttgaaattttcagaagattgggaggaactcctagaggttaagtttgttagggct
ttggaggatgccatacaaaatcatctggttttgctttctaaaattagtggtataaaagat
gtcaaggctgattcactaccgaaggcatcaaatgagacagatgaagatgtttcttacaac
atatcccagcatggtgtagaagatgatgacgatggcggtgcagatgacagtgaacatggt
gaaggagctgaggattttgggttggatgcacaaaaacgaaagcggcagggcacagatgag
atggagtatgaagatgactgtgaggatgaagtgaatgaaggtcatcagtccgatggattt
gaaagtgaaattgataaggtggaaagtgatattgaaagtgataaggatggtgtgacgcgg
atttcagatgctaatgatgaaatgcctgaaagtccttcagctggagacacatctaagcca
cggtcgaagggaaagaagaccaaatcaagggacaaaattaaaaagaagaccagagcaaag
ctagtaagaaaggagtatgacagggcaacttttgtgtcggtcaaggggttccactttgag
atccattttaaatttaccaatgaacctcatattcttttggatcagattgctcggaagacg
gctcgaaatgtttatgtcaaaagctctggcaatattttggattgtaaagatattgatatt
tatggtaatgaagatcaagttttctgctcctggaatgatcccagaaataaattaccgggt
gaaaagaatcccacggaagaagaaaagaagatgcgagccttgcagacagcagggttggat
tttgctacactatggaaactgcaagatgatcttgatgtcaactatatatattccaacaac
attcatgcaatgctgaacacttatggagtagaagccgccagagaaactatcatcaaagaa
ataagtaacgtcttcaaggtttatgggatatctgtcaatattagacacctttcactaata
gctgactacatgactcatagtggcggttatcgtccaatgaacagatttgggggtatagca
gagtctgtatctccgatcaataaaatgtcatttgagacggcttccaagttcattcgtgaa
gcagcatatcatggggagacggatgacttggaaaccccttctgctaggatctgtcttggg
ctgccagtgaaagtgggtactggttgttttgatttgatgcaaaagatggagatttaa
DBGET
integrated database retrieval system
