Rosa chinensis (China rose): 112191646
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Entry
112191646 CDS
T06020
Name
(RefSeq) amino acid transporter AVT1D isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112191646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112191646
Transporters [BR:
rcn02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
112191646
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
112191646
NCBI-ProteinID:
XP_040372029
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Position
3:12748386..12753462
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AA seq
544 aa
AA seq
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MSSWTKLDEDLGPERGDDDFLTDDEENQAHRNNYEPSEAETESEVGRPEGIAISAPNNNA
WPQSYWQSIDMYTNVMTPPSLPSLTFMRSRGPSFSSLSSFVKGQQAPDDNSSQLSSKLLA
SEASLEKEGLAASSPPTLSAKNSVCELPPPKEHSCSFSQAVLNGINVLCGMGLITTPYAI
KEGGWLSLILLALFGVICCYTGILLMRCLESCPGLRTYPDIGQAAFGSTGRLILSIILYL
ELYGACVEFLTMMGDNLAAIFPNTHIAFAGIHLQSHEIFAITATLVVLPTVWLQNLSLLS
YLSVGGVGASILVAFLLLWVGAVNQVGFHHSGSALNLSGLSVTIGIYGFGYAGHSVFPNI
YTSMRKPSQFPAVLLTCGAFCFFMYTGVAICGYLMFGDSVRSQFTLNMPEEFVASKIAVW
TTIVNPMTKYALTITPVALSLEELFPVAWMGSHLASILTRTVLVLSTLVVALSFPFFGAV
MALMGSLLAMLVAIIFPGVCYLILLKGRLTKSQITTCVFVIMLGVLCSIIGTYSSITKIA
EQMD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggacgaagctggatgaggatcttggaccggagcgcggggacgatgatttt
ttaacagatgatgaagagaaccaagcacacagaaacaactatgagccttccgaagccgaa
actgaatctgaagtaggcagacctgagggcattgccattagtgcacctaacaataatgca
tggcctcagagctactggcagtccatcgatatgtacaccaatgtcatgactcctccttcc
cttccttcccttacttttatgcgatcaagagggcccagtttcagctccttgtcttcgttt
gttaaggggcaacaagcacctgatgataattcttcacagctcagtagcaaattacttgct
tccgaagcaagtttagaaaaagaagggcttgcagcatcatctcccccaactctctccgca
aaaaattcagtctgtgaattgccaccgccaaaggaacatagttgttcattttcacaagct
gtactcaatggaatcaatgtcttgtgtgggatgggacttattacaacaccatatgcaata
aaagaaggagggtggttgagcctcattttacttgcattgtttggtgtgatatgttgctat
actggaattttattaatgcgatgtttagaaagttgtcccggactccgaacctatccagat
attggccaggctgcttttggctctactggccgtttaattctatctataattttgtatcta
gaactatatggtgcttgtgtggagtttttgacgatgatgggcgataacttagcggcaata
ttcccaaacacccacatagcatttgcaggaatccatcttcaaagtcatgaaatttttgcc
atcacagcgactcttgtagttcttcccactgtatggcttcaaaatcttagtttgctctct
tacctctcagttggaggagtaggtgcatcgattctggtggcctttttattgctgtgggtt
ggggctgtgaaccaagttggctttcatcacagtggatccgccttaaacctttccggtttg
tctgtcacaattggtatatatggtttcggctacgctggtcattcagtgttcccaaatatc
tacacatctatgagaaaaccatctcaatttccagcagttctactaacctgtggtgccttt
tgcttcttcatgtatactggggtagcaatatgtggctatctaatgtttggagactcggtg
aggtctcagttcactctaaacatgcccgaagaatttgttgcttcaaaaattgcagtctgg
acaacaattgtgaacccgatgacaaagtatgccctcacaataacgcccgttgctctgagt
ttagaagaactctttcctgtagcttggatgggatctcatttggcttcaatccttacaaga
acagttctagttctatcaactttggtcgtagcgttgagctttccattctttggtgcggtg
atggcattgatgggatccttacttgcaatgttagtggctattatcttcccaggggtctgt
tatctcatcctacttaaaggtagattaactaagtcgcagattacaacttgcgttttcgtt
ataatgctgggggtgttgtgctctattattggcacatattcatcaattacaaaaatagct
gaacaaatggactaa
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